Monomorium pharaonis (pharaoh ant): 105831057
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Entry
105831057 CDS
T05760
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105831057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mpha03041
]
105831057
Spliceosome [BR:
mpha03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
105831057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_Gbeta
EIF3I
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
PRP4
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_Nup120_160
WD40_like
DUF7979
Motif
Other DBs
NCBI-GeneID:
105831057
NCBI-ProteinID:
XP_012526362
LinkDB
All DBs
Position
3:complement(14609539..14612063)
Genome browser
AA seq
523 aa
AA seq
DB search
MSDDEDLVYVKKQKTVHYGSLEEAERARLAAAVETTDEEKDVTNANDVANASASGGNVHI
SNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKHLRQLGEPICLFGEGPAD
RRTRLRELLASVGEDAIKKKHEEEDKPIHTIEKDTESTWYHEGPESLQIARSWIAMYSLP
RAKARLDKARQDLLLPAATRTAKRQELLKKLQALSIYCSQIGDTRPISFCQFSPNSKILA
TASWSGLCKLWSVPDCTLLRTLQGHNYSVGCIVFHPKATITEDVIGDNAGQTCVLASCAT
DGTVKLWSGGNGEEPLAEVEGHEPHRVNRIAFHPSGRFLGTCCHDASWRLWDLEQQAEVL
HQEGHARAVYCISFQCDGSVCTTGGQDSFGRVWDLRTGRCIMFMEGHLTSILGIDFSPNG
FHIATASEDNTCKIWDLRKRTCIYTIPSHTNLLSDVKYQRTEGQYLVTASYDNTAKIWSN
KTWQPLKELPGHDGKVMSVDVSPDHKFIATSSYDRTFKLWAPE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgacgaggatttggtttacgtgaagaaacagaaaactgtccactatggctct
ctggaggaggcagaacgtgcacgacttgcagctgcggtcgaaactacagacgaagagaaa
gatgttacaaatgcaaacgatgttgccaatgcttctgcttcgggaggaaatgtacatatc
tcgaatgagtacatggagcttgaagatgaaatgtccaaagatcgacaggcgcttttggag
gaatttgagcgtaggaaaaaggccagacaaattaatgtttctacagacgattctgaagta
aagaaacatctgagacaattaggcgagccaatatgtctattcggggaaggtccagcggat
agaagaacaagattaagagaattattagccagtgtaggagaggacgctattaaaaagaaa
catgaagaggaggataaaccgattcacaccattgaaaaggatacggagtcaacttggtat
cacgaggggccagagtctttgcaaattgcacgatcgtggatagcaatgtattcattgccc
agagcaaaggcacgattggataaggcaaggcaagatttactattacctgctgcaactcgt
acggcaaagaggcaagaacttctgaagaagttacaagcattgagcatttattgttctcaa
attggtgacacgagacccatttccttctgccagtttagtcctaattcaaaaattcttgct
acagcttcatggtcaggcttgtgcaagttatggtctgtacctgactgtactttgttacgc
actttacaaggacacaattatagtgttggctgtattgtttttcatccaaaagctacaata
actgaagatgtgataggtgataatgcaggacagacttgcgtgctggcatcttgtgcgaca
gatggtaccgtgaaactgtggagtggtggcaatggtgaagaaccattagcagaagtggaa
ggacatgaacctcacagagttaacaggatagcgtttcatccatctggacgatttctcggc
acgtgttgtcacgacgcgtcctggcgattgtgggatttggagcaacaagcggaagtactt
catcaagaaggtcatgctagagcagtatactgtattagctttcaatgcgacggaagcgtt
tgcactacaggcggtcaggactctttcggcagagtgtgggacttgcgtactggcagatgc
ataatgtttatggagggtcatctaacgtccattttaggcatcgatttctcgccaaacggt
tttcatatagcgacggcgagcgaagacaacacctgcaaaatatgggacttgcgaaagcga
acttgcatatacacaataccatcacacactaatttgctgtccgacgtgaagtaccaaaga
acagaagggcagtacttggtaactgcatcttacgacaacacggccaaaatttggtccaac
aagacatggcaacctctcaaagagctaccaggtcacgatggaaaagtcatgtccgttgat
gtgtcacccgatcataaatttattgcaaccagttcgtacgacagaacgtttaaattatgg
gctccagaataa
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