Monomorium pharaonis (pharaoh ant): 105831251
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Entry
105831251 CDS
T05760
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105831251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105831251
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105831251
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
105831251
NCBI-ProteinID:
XP_012527116
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Position
5:2192819..2196070
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AA seq
517 aa
AA seq
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MADESEDQWLYGDSTDSKEYTPTNVQSEVQQNDDSTLADGQENSNTQEDQKMEGAGQTPS
EMQEAVDSLGGGDEESSMNNVQEENTDANKNGTREASSQEDGEAASESDSDDDVHVVIGD
IKSTPAYGSLNIKRGGLLTNTSGVSDKLSKQPGKFSIDEFETIGVINGIPAHEFNLDQLE
DKPWRQPGADITDYFNYGFNEDTWRAYCERQKRMRSESGVGLILNAGGGGGNPSSMRMPQ
VAITNDNSKYSGIMGPKRAGPPPGRKMAGTIDVIGSSGLASRRNLDKSPPKGNVIQVMTA
DRREYSRKPGFPDMSIPPPGAGMPPPPFDMPPPGYAGEPTPFYMPETDPYYQSYEPTQDN
QWGNDPTWQPTNLAIPMTEGEDDKDMGPKTIPTMVPPTSIPPLMQARDQRDGRDRDRDRD
RDRDRELDSMSRDRDKDRDRDREKDSMMRDRDRDRDSMTRDEDRERDRSRSQYRHKDRHR
HRSRSRSRRHKSRSRSPSRRKKKSRRSDRERSKEESE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaaagcgaggatcagtggttgtacggggattcgaccgacagcaaggagtat
acaccgacaaatgttcaatcggaggttcagcagaacgatgactcgacgctcgccgacggt
caggaaaactcgaacactcaagaggatcagaagatggaaggtgcaggtcaaactccgtcc
gagatgcaagaggccgtcgattcccttggtggtggcgacgaagaatcctccatgaataat
gtgcaagaagagaacacagatgcgaataaaaacggaacgagggaagcttctagtcaggag
gatggtgaagcagccagcgaatctgattctgatgacgatgtgcatgttgttattggtgat
attaaatcgacgccggcgtatggcagtttaaatatcaagagaggaggactgctgaccaac
acgtccggtgtatcggacaaactaagtaaacagccaggaaagttcagtatagatgaattc
gagactattggtgtcatcaatgggataccagcccatgaattcaatttagatcaattagaa
gataaaccatggaggcagcctggtgcagacatcacagattactttaactatggcttcaat
gaagatacctggagggcatactgcgaacgtcagaagcgaatgcgaagcgaatctggggtg
ggattaatcttgaatgcaggtggcggtggtggcaatccgagcagtatgagaatgcctcag
gtggcgatcaccaatgacaacagcaaatactccggcattatgggccccaagagggcgggc
ccaccacctggcagaaaaatggcaggaactatagatgttataggaagctccggtttagct
tccagaagaaatttggataaatccccaccgaaaggaaacgttatacaagttatgactgct
gacagaagagagtactctagaaagccaggttttcccgatatgagcataccaccacctggc
gcgggaatgccgccgccaccgtttgatatgcctccgccgggatacgctggcgaaccgacg
ccattctacatgccggaaaccgatccgtattaccagagttatgaaccaacgcaggacaac
cagtggggtaatgatccgacatggcagccgacaaatctagcaattccaatgaccgaaggt
gaagatgacaaagacatgggacctaaaacaatacccacaatggttccaccgacatccatt
cctcctctgatgcaggcgcgcgatcagagagacggcagggaccgagatcgagacagggat
agagatcgagaccgagaattggattctatgagcagagatagggacaaggatagagatcgt
gatagagagaaggattccatgatgagagatcgcgatagagatagggattctatgacgcga
gatgaggaccgagagcgtgatagatccagatctcaatatcgacataaagatcgacatcgg
catcgatcaagatctcgatctcgtagacacaagtcgagatcgcgaagtccgagtcgacgt
aagaagaaatctcgacgttcggatagagagcgttccaaggaagaaagtgaataa
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