Monomorium pharaonis (pharaoh ant): 105831500
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Entry
105831500 CDS
T05760
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X2
KO
K14407
cleavage stimulation factor subunit 2
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105831500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105831500
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
105831500
U7-dependent histone pre-mRNA processing factors
105831500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
DUF908
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
105831500
NCBI-ProteinID:
XP_012527123
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All DBs
Position
6:2124930..2128548
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AA seq
467 aa
AA seq
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MSNSTISDQSLMDKSMRSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGY
GFCEYKDQETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQSLLQGQNTENPYGEAVQ
SDKAPEAISKAVASLPPEQMFELMKQMKLCVQNNPNEARQMLLQNPQLAYALLQAQVVMR
IVDPHTAVSMLHKANPIPGVLTPSEKPIPQIQPKIEEPWAPRPPPPVNAPASIFAGQDVD
LRLNRQINPRVAMDQDSRGSLDKEFKFDIQSVKTGQDVDLRLDRQIDPRVARMDQDLRGS
PQTQPAPVSAPSVLPVTADPRGANVFNVTDNFYRDPRSERFGRDSRDLRDSRMPIDPRIT
KPNPTPVAPPIVPRPVAAPTVPAPSVVTSNTTGSSAALSQSASSATSRLVAGMSPAGNIP
SGASDQEKAALIMQVLQLSDEQIAMLPPEQRQSILVLKEQIAKSTQR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattcaactatttcggatcaatcgctgatggacaaatcgatgcggagtgttttc
gtcgggaatatcccgtacgaggctacagaggagaatctgaaggatatctttagcgaggtt
gggccggtgctctcgttcaaattagtatttgatcgtgagacaggcaagcccaaaggatat
ggattctgtgaatacaaagatcaagagacagctctaagtgctatgagaaatctgaatgga
tatgaaattggtggacgaacattacgtgtggacaatgcttgtacggagaaaagtcgtatg
gagatgcaaagtcttctgcagggacagaacacagagaatccttatggggaggctgttcaa
tcagacaaggcaccagaggcaataagtaaagccgtggcatctttaccaccagagcagatg
tttgagctgatgaaacagatgaagctctgtgtgcaaaataatccaaacgaggcacgtcag
atgctcctgcagaatcctcagctggcatacgctctgctccaagcacaagtggtcatgaga
atagtcgatccacacacagctgtcagtatgttgcacaaggccaatcctatcccaggtgta
ttgacaccatccgagaaacctattccacagatacaaccgaaaattgaggaaccatgggca
ccgcgacccccgccacctgttaacgccccagcgtccatttttgctggtcaggacgtagat
ctccgattgaacaggcagataaatccgcgtgtagctatggatcaagattcgagaggatca
ctggacaaggaatttaaatttgacattcaatccgtaaaaacaggtcaggatgtagatctt
cgactagacagacaaatagatccgcgtgtagctaggatggatcaagatttaagaggatcg
cctcaaacgcaacctgcgccggtcagcgcaccgtcggtgttgccggttaccgccgatcca
aggggggcaaacgtgtttaacgtcacggacaacttctaccgtgatccgagatccgagaga
tttggcagagattcgagagatcttagggattcccgaatgcccatcgatcctaggattact
aaacctaatccgactcctgttgctccaccgatcgttccaagaccggttgctgcaccaact
gtaccagcaccgagtgtcgtaactagcaatacaaccggctcctctgctgcgctttcgcag
tctgcgagttctgcaacttcaaggctagtggccggaatgtctccagcgggaaatattcct
agtggtgcgtccgatcaggagaaggcggccttgataatgcaagtgttgcaattatctgac
gagcaaattgcaatgcttccgcctgagcagaggcaaagtatcttagtgttaaaggaacag
attgcgaagagtacacaacgttag
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