KEGG   Monomorium pharaonis (pharaoh ant): 105831760
Entry
105831760         CDS       T05760                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
mpha  Monomorium pharaonis (pharaoh ant)
Pathway
mpha03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mpha00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105831760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpha03019]
    105831760
Messenger RNA biogenesis [BR:mpha03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     105831760
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     105831760
SSDB
Motif
Pfam: ECR1_N EXOSC1 RRP4_S1 ECR1_N_2 DUF2639
Other DBs
NCBI-GeneID: 105831760
NCBI-ProteinID: XP_012527590
LinkDB
Position
1:25143109..25340132
AA seq 199 aa
MSEREELIICVPGQRLCVSDKSNVAGRGTYEQQGYIYSKLAGIVKLVTDEKTHTIEVHSM
TEQSIIPAPGDIVTAVVTVVNQRFCKCSIKCVGDIVLTRPYRGILRKEDVRVIEKDKIEM
YKCYRPGDIILARVMPMTEIHTYQLSTAENELGVVIAHSDEGVAMVPISWTQMQCPKSLC
KEFRKVAKVVPEHIVAEQA
NT seq 600 nt   +upstreamnt  +downstreamnt
atgagcgaacgggaggagcttattatctgcgtaccaggccaaagattatgcgtgtccgat
aaaagcaatgtagctggtcgcggaacgtacgagcaacaaggttatatttattcgaaactc
gctggcattgtaaaattagtgacggatgaaaaaacccatacaattgaggtacacagtatg
acagagcagagcatcattcctgcaccaggagacattgtcactgccgtggtcactgtagtc
aatcaaagattttgtaaatgcagcatcaaatgtgtaggcgacatagtactgacgagacct
tacagaggtatactgaggaaagaggacgtccgggtgattgaaaaagacaaaatagagatg
tacaagtgctatcggcctggcgacatcattctcgcaagagttatgccaatgacagaaata
cacacttaccaattgagcaccgcggaaaatgagctaggggtagttattgctcacagtgac
gaaggtgtagctatggtaccaatcagctggacacagatgcagtgtccgaagtctttgtgc
aaggaatttcgtaaagttgctaaagttgtgccagaacacattgtggcagaacaagcttag

DBGET integrated database retrieval system