Monomorium pharaonis (pharaoh ant): 105831760
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Entry
105831760 CDS
T05760
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105831760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105831760
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105831760
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
105831760
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
RRP4_S1
ECR1_N_2
DUF2639
Motif
Other DBs
NCBI-GeneID:
105831760
NCBI-ProteinID:
XP_012527590
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Position
1:25143109..25340132
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AA seq
199 aa
AA seq
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MSEREELIICVPGQRLCVSDKSNVAGRGTYEQQGYIYSKLAGIVKLVTDEKTHTIEVHSM
TEQSIIPAPGDIVTAVVTVVNQRFCKCSIKCVGDIVLTRPYRGILRKEDVRVIEKDKIEM
YKCYRPGDIILARVMPMTEIHTYQLSTAENELGVVIAHSDEGVAMVPISWTQMQCPKSLC
KEFRKVAKVVPEHIVAEQA
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacgggaggagcttattatctgcgtaccaggccaaagattatgcgtgtccgat
aaaagcaatgtagctggtcgcggaacgtacgagcaacaaggttatatttattcgaaactc
gctggcattgtaaaattagtgacggatgaaaaaacccatacaattgaggtacacagtatg
acagagcagagcatcattcctgcaccaggagacattgtcactgccgtggtcactgtagtc
aatcaaagattttgtaaatgcagcatcaaatgtgtaggcgacatagtactgacgagacct
tacagaggtatactgaggaaagaggacgtccgggtgattgaaaaagacaaaatagagatg
tacaagtgctatcggcctggcgacatcattctcgcaagagttatgccaatgacagaaata
cacacttaccaattgagcaccgcggaaaatgagctaggggtagttattgctcacagtgac
gaaggtgtagctatggtaccaatcagctggacacagatgcagtgtccgaagtctttgtgc
aaggaatttcgtaaagttgctaaagttgtgccagaacacattgtggcagaacaagcttag
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