Monomorium pharaonis (pharaoh ant): 105832644
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Entry
105832644 CDS
T05760
Name
(RefSeq) endoribonuclease Dcr-1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpha03036
]
105832644
Chromosome and associated proteins [BR:
mpha03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
105832644
microRNA pathway
RISC loading complex
105832644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_platform
Dicer_dsRBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
Dicer_PBD
ResIII
DEAD
DUF6820
Motif
Other DBs
NCBI-GeneID:
105832644
NCBI-ProteinID:
XP_012529231
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All DBs
Position
7:complement(12674496..12686594)
Genome browser
AA seq
1985 aa
AA seq
DB search
MAFPLNDQVYTKSFTPREYEVELLYTAKEKNIIVCLGKNSEQTFLSIKLIQEFATNNRRL
ISDGGKRAVYILNDQNKCTIIGTYIKQLTDLKVLACNSGALEEFDESFQSSHILVGTLKV
YAQLISEKKLSPCHINLVIVDECHKSIQDSNLKFVLQTFLSCNNVPRIIGLAVPVFNLTQ
EPGRLGLEIEKVETAFQCQVETANDILSIIRYSPKPREYVVEYDRGEKKDLYNTLKSCVL
HAIEFLRDHRYDPMEIYTEEFYEDIQKIPDPIQKPFEMMQDFLYILETLGPWCADRAALT
LLFLTEKLKIKTPYERHYLLLNMMTSVFIKIRALCDNEFQHLSEKERIYQYSTPKVHRLL
QILKIYTPFYIRETNTPEKKANADINSKNCVTKSDKNISFSRNQEKPVKRFGGNWKSNDD
NYKKYKSQRYPCSGTDPDHLCGVIFVDKGFTAKVLFYLLSEICKHDEDLHFLSPLYTIER
NPDDVGYSRDLEMEHRKQEEVLKRFRIHECNLLIATSILEEGIDIPKCNFVMRYDFPKNY
QSYIQCKSRARAMDALHVLLVPQEASKELIWQLAQYQYIEKTLLLKCSNKELTEDEETEA
DMYAAMIPHYKPLNGDDAPKVTFNSAISLVNRYCAKLPSDTFTRLTPEWRIERVNVHDTV
MYICLLRLPINSPLKYVITSYPMPNRAMARRMAALQMCIDLHRENEIDDNLLPIGKENFK
AKPEDAEVPALPDESRADFSEARPGTTKRRQYYYKKTAEALTDCRPVVGVPSYLYHINMV
LSCPLPEEQNTRGRRIYPPEESAIGFGILTLKKIPKLCPFPIYTRSGEVHVQLKLSKETV
ILDEVQIERVDTFLNYTFTNVLRLQKYLMLFDPNASENSYIIVPVKILASEGSDVSVDWN
FLECIYQNRNAVPTKIPEEDRKNFKFDPSKYYDAVIMPWYRSQDQPQYFYVAEICTNLNP
KSSFPGHDYSTFEEYYLKKYGIQIQNLEQSLLDVDHTSARLNFLTPRYVNRKGVALPTSS
EETKRAKRENLEQKQILVAELCAIHPFPASLWRQAVCLPCILYRINALLLANQIRCQVAH
MINLGQENLNSDFEWPALDFGWSLAEVLKKSKETEKTKQTKSDNIQDSSLNDVDSNKCQN
VTSGQDTNNKQYISSNEIESCKQVKLEPTDNARTDEVEKDETIADEEQKDDELEIGTWSN
DMAWSNDVTMNSSMDYNTSDNLKSFPLNVTACVLPQDFVWNDIRYGSPTYESDFDGYESD
DVYSDGFADTSDESEAESRGLKISYMGENIAEAVEDEKQICKQEINKKILDLLETEKNFD
NNFWMYAEKDQELSLAKHKEAHYEFAKRKEHEIMTDGTFISCNSDIAIKRKNSLSCQTEC
KKPNYKHKDYIETVVKRFTCEVLNKKLPNESARMIKKEINKPNEGNYLNNHLFSFDYQPE
LKGHPGPSPSLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSH
LRSKQVSNLNLYRLGRQKMLGESMIATKFEPHDNWLPPCYYVPKELEQALIESGVPSALW
NQADIPTLQAVNPTEITQLVKETEEKLVIMKSELDKNESRLSNNLDNLRCFIPYNLITQH
SIPDKSIADCVEALIGAYLIACGPRGALLFMTWLGIHVLPTEQVCVISENEPEERIPGST
PYIKKVDQRGKTTWTQICYGKLEEPQNPLLRYIHDPESELYMMLDGYEELEKSIGYKFRD
SSYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHSPGALTDLRSAL
VNNTIFASLAVRCGFHKYFRHLSPGLSVVINRFVRIQEENGHSISEEYYLIGEEECEEAE
DVEVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYTIMKSEIEQFSTNVPKSPIRELLEL
EPETAKFGRPEKLADGRRVRVTVDVFGKGSFKGIGRNYRIAKCTAAKCALKKLKSKAQNY
PRQKL
NT seq
5958 nt
NT seq
+upstream
nt +downstream
nt
atggcatttccactaaatgaccaggtttatacaaaatcttttactccaagagagtacgag
gtagaacttctttatacagcgaaagaaaaaaatataattgtctgtttgggaaaaaattct
gagcaaacctttctttctataaaattgattcaagagtttgcaactaataataggagatta
atcagcgatggtggaaaacgagcagtatatatactaaacgatcaaaacaagtgtacaata
ataggaacttacataaagcaattaacggatctgaaagtactagcatgcaattctggtgca
cttgaggaatttgatgaaagttttcaaagttctcatatattagttggaacactaaaggtc
tacgcacaactaatatcggaaaagaaactttcaccatgtcacataaatctagtcatagta
gacgagtgccataagtctatccaagatagcaatctaaagtttgttctgcaaactttttta
tcgtgcaacaatgttcctagaataattggattagcggtaccggtgtttaatttgacacaa
gaacctggaagattgggcttagagatagagaaagtagaaactgccttccagtgtcaagtg
gaaactgctaatgatattctttcaataatacgttacagtccaaaaccaagagagtatgtt
gtggaatatgataggggagaaaagaaagacttgtataatacgcttaaaagttgcgttcta
catgcgattgaatttttacgggatcatcggtatgatccaatggagatttataccgaagaa
ttttatgaggacattcaaaaaattcctgaccccatacaaaaaccttttgagatgatgcaa
gattttttgtacatattggaaactcttggaccatggtgtgcggatcgtgctgctctaacg
ttactatttctaacagaaaaattgaaaatcaaaactccatatgagaggcattatcttcta
ttaaacatgatgacatctgtttttataaaaattcgtgccctttgtgataacgaatttcaa
catttatctgagaaagaaaggatatatcaatatagtactccaaaagttcatcgactattg
caaatcttaaaaatttacactcctttttatatcagagagactaacactccagaaaagaag
gcgaatgctgatattaattcaaagaattgtgttactaaaagtgacaaaaatatttctttc
tcgagaaatcaggaaaaacctgtgaaaaggtttggaggtaattggaaatctaacgatgat
aattacaaaaagtacaaatcacaacgttacccctgtagtggtacagatcctgatcacctc
tgtggagtaatttttgtggacaaaggattcacagctaaagttttattttatttattaagc
gaaatatgcaaacatgacgaagatttgcactttttgtcacctctttataccattgaaaga
aaccctgatgacgttggttattcaagagatttagaaatggaacatagaaagcaggaagaa
gtcttaaagcgatttagaattcatgaatgcaacttattgattgcaacttcaatcttggaa
gaaggcatcgatattccaaaatgcaattttgtgatgagatatgactttccgaagaattat
cagtcatatatacaatgtaagagtagagcgagagccatggatgccttgcatgtattattg
gtgccacaagaagcatctaaagaacttatatggcagttagctcaatatcaatatatagaa
aagactttattattaaaatgttctaataaagagctaactgaggacgaagagactgaagca
gacatgtatgctgcaatgataccacattacaaaccactcaatggtgacgatgctcctaaa
gtgacttttaattctgctatttcgttagttaatagatattgcgcgaaattaccgagcgat
acattcacgagattaacaccagaatggcgtattgagagggtaaacgtccatgatacagtc
atgtatatttgtttgttacgtcttcctattaattcaccgttgaaatatgttattacgtca
tatccaatgccgaatagagcgatggctagacgtatggctgccttgcaaatgtgtatcgat
ctacatcgagaaaatgagatagatgataatttattacctatcggaaaggaaaactttaaa
gctaaacccgaagatgcagaggtacccgccttgccagatgaaagcagagctgacttttca
gaagctagaccggggacgacaaaacggcgacaatattattataaaaagacagctgaagca
ttaacggattgtagaccggtagttggagtaccgtcttatctatatcacattaacatggta
ctaagttgtcctttacccgaagagcaaaatacacgtggtagacgtatttatcctcctgaa
gaatcggccattggatttggtatacttacattaaagaagatacccaagttgtgtccattc
cctatttatactaggtctggtgaagttcatgtgcaattaaaacttagtaaggaaactgta
attctggatgaagttcagatagaaagagttgacacttttcttaattatacttttacaaac
gttttgagattacaaaaatatctaatgctctttgatccaaacgcttccgagaattcatat
ataattgtaccagtaaaaatacttgcgtctgaaggatcggatgttagtgtggattggaat
tttttggaatgtatttatcagaaccgaaatgcagtgccaactaagattccagaagaagat
agaaaaaattttaaatttgatccatctaaatattatgatgctgtaatcatgccatggtat
agaagtcaagatcaaccgcagtacttctatgtagcggaaatatgcacgaacttaaatcca
aaatcttcttttcccggacatgactatagcacttttgaagaatattacttgaaaaagtac
ggaatacaaatacaaaatctagagcaatcattgttagatgtggatcatacatcagccaga
ttaaactttttaactcctagatatgtaaatcgcaaaggtgtcgcattacctacaagcagc
gaagagacaaaacgtgcaaagagagaaaatttagaacagaaacaaattctcgttgctgaa
ttatgcgctattcatccttttccagcgtctttatggagacaagcggtctgcttaccctgc
atattatatagaatcaatgccttgttgctcgctaatcagatacgatgtcaagttgcacat
atgataaatttaggacaagaaaatctgaattcagatttcgagtggccggcgttagatttt
gggtggagcttggcagaggtattgaaaaaatcgaaggaaacggaaaaaacgaaacagact
aaaagtgacaatattcaggattcgtctttgaacgatgtagacagtaataagtgtcaaaat
gtgacatctggccaagatacgaataataaacagtatatatcgtccaacgagattgagtcg
tgcaaacaagtgaaactggaacccaccgacaatgcacgaaccgatgaagtagagaaagat
gagacgattgcagacgaggagcagaaagatgatgagctggagattggtacatggtcaaac
gatatggcatggtcaaacgatgtgacgatgaattcttcgatggattataacacttcggat
aatctgaaatcgtttcctctaaatgtgacggcttgtgtgttgccacaagattttgtttgg
aatgacattcgatatggttcgccaacgtacgagtctgatttcgatggttacgaatcagat
gacgtatatagcgacggctttgccgatacatctgacgaaagtgaggctgaaagtaggggt
ttaaagatttcttacatgggagaaaatatcgccgaagcagtggaggatgagaaacaaata
tgtaaacaggagatcaacaaaaaaatcttggatcttttagagacggaaaaaaattttgac
aataatttttggatgtatgcggaaaaggatcaagagttatcactcgcgaaacataaagaa
gcacattatgagtttgccaagagaaaggagcacgaaataatgactgacggtacttttata
tcttgcaattcagatattgcgattaagaggaaaaactcattgagttgccaaactgagtgc
aaaaagccgaattataaacataaagactatatagaaactgttgtaaaaagatttacttgc
gaagtattaaataagaagctacctaatgaatctgctcgcatgataaaaaaagagattaac
aaaccaaacgaaggaaattatttaaataaccatctctttagtttcgattatcaaccagaa
ttaaaaggtcatccaggaccaagtcctagtctgatcctccaagctttaacaatgtctaat
gcgaatgatgggattaatttagagcggttggaaactatcggcgattcattcctcaagtat
gctataactacatatttgtattgcacgtatgacaatatccacgaaggaaagcttagtcac
ttgagatcaaagcaggtcagcaatttaaatctttacagactcggcagacagaagatgctc
ggcgagagcatgatagcgaccaagtttgagccgcatgacaattggctacctccttgttac
tacgttcccaaggaactcgagcaagcattgatcgaatctggcgtcccttctgctctgtgg
aatcaagctgatattcctactttgcaagccgttaaccctaccgaaataactcaactcgtt
aaagagactgaggaaaaactcgtcattatgaaaagtgaattggataaaaacgaaagtaga
ctgtcaaacaatttagataatttgcgatgcttcataccttacaatttaattacgcagcac
agtattcccgataaaagtatcgcggattgtgtggaagctttgataggagcatatttaata
gcatgtggaccccgtggggcgcttctcttcatgacttggttaggaattcatgttttgcct
accgagcaagtttgtgtgataagcgaaaatgagccagaagaaagaatacccggtagtaca
ccatacataaagaaagtcgatcaacgtggtaaaactacatggacacaaatttgttatgga
aagttggaagaaccacaaaatccattgctccgttacattcatgatccggagagcgaactg
tatatgatgctcgacgggtacgaagaattggaaaaaagtataggatataaatttcgtgac
agtagttatcttttgcaagcattcacgcatgcctcttatcagccaaaccgattaacagat
tgttatcaacgtttggaatttcttggcgatgctgtactagattatttaataactagacat
ttatatgaggattctcggcaacattcgccaggtgctttaactgatttaagatccgcttta
gtcaataacacgatatttgcttctttagctgtgaggtgtggttttcataaatattttcgc
cacctttctcctgggctaagtgtagtaataaatcgttttgtcagaatacaagaagaaaat
ggacattccattagcgaagagtattacttaattggcgaagaggaatgtgaggaagctgaa
gacgtagaggttccaaaggcactaggtgatgtttttgagtcattagctggcgctatttac
ttggatagcggaatgtctcttgatgcggtgtggagtgtttattacacaataatgaagtca
gaaattgaacaattcagtacaaatgttcctaaatctccaattcgtgaattattggaatta
gaacctgaaacagcaaaatttggtaggcctgagaaattggccgatggccgtagagttcga
gtaaccgtagacgtctttggtaagggttcttttaaaggaatcggacgaaattacagaatt
gcaaaatgtacagcggctaaatgcgccttaaagaagttaaaaagcaaagcacagaactat
ccaaggcaaaaactatga
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integrated database retrieval system
