Monomorium pharaonis (pharaoh ant): 105832762
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Entry
105832762 CDS
T05760
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105832762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpha03021
]
105832762
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105832762
Transcription machinery [BR:
mpha03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105832762
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105832762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCHC
zf-CCCH_2
zf-CCCH_4
Nab2-like_zf-CCCH_
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
105832762
NCBI-ProteinID:
XP_012529433
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MECIVANVEHMRFDIEEALDEQYGALPLPFTGMDKSIAAVCQFYPRGTCNKGASCPFRHV
RGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPETK
VRDCPWYDRXFCRHGPLCRHRHVRRVLCMAYLAGFCPEGSNCKFMHPRFELPAVQDMQPK
EGKKVMITCHFCGEGGHKAIYCNKMPPDVREAQVRQELDNSHTSHHHMNNGPPPPRGPQK
PLEEVTCYKCGQKGHYANKCPKGHLAFLSHAGSGGGAQNQNYRR
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtatagtagcgaacgtggaacacatgcgatttgacattgaggaagctctcgat
gagcaatatggagctcttccattaccttttaccggcatggacaaatcaattgctgcagta
tgtcagttttacccgagaggcacttgtaataaaggagcttcgtgtccattcagacatgtt
cgtggcgatcgtacgatagtatgtaaacattggttaagaggtctttgcaaaaagggtgat
caatgtgaatttctacacgagtatgacatgacaaaaatgccagaatgttatttttattcc
agattcaatgcatgtcacaataaggaatgtccattcttacacatcgatcctgagactaaa
gtgagagattgcccatggtatgatcgtnggttctgcaggcatggtccattgtgtcgacat
cgacatgtcagacgcgttttgtgtatggcttacttggctggtttttgtccagaggggtca
aattgcaaattcatgcatccaagatttgaattgccagcggtacaagatatgcaaccgaag
gaaggcaagaaggtgatgatcacgtgtcacttttgtggtgaaggaggtcataaagcgatc
tactgcaacaaaatgcctcccgatgtaagagaggctcaagttcggcaagagctcgacaac
tctcacacatcgcatcatcacatgaacaatggaccaccgccgccgcgagggccgcaaaag
ccacttgaagaagtaacgtgttacaagtgtggacaaaaaggtcattacgctaataaatgt
ccaaaaggtcatttagcatttttgagtcatgcaggtagcggaggtggcgcacaaaatcag
aattatcggagatga
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integrated database retrieval system
