Monomorium pharaonis (pharaoh ant): 105832822
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Entry
105832822 CDS
T05760
Name
(RefSeq) probable histone-binding protein Caf1
KO
K10752
histone-binding protein RBBP4
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03082
ATP-dependent chromatin remodeling
mpha03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105832822
03083 Polycomb repressive complex
105832822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpha03036
]
105832822
Chromosome and associated proteins [BR:
mpha03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
105832822
Histone modification proteins
HAT complexes
HATB complex
105832822
HDAC complexes
Sin3A-HDAC complex
105832822
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
105832822
PRC2.2
105832822
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
105832822
Heterochromatin formation proteins
Other heterochromatin formation proteins
105832822
Chromatin remodeling factors
NuRD complex
105832822
NuRF complex
105832822
NuRF complex (fruit fly)
105832822
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
eIF2A
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_SPT8
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
105832822
NCBI-ProteinID:
XP_028048566
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MTEPNEIEMIEPNEIEMIESNEIEVIELNSNKDIPITGSAELNISNSEKTVNLRTEITRT
EFNMIAKVEDNMSEKSINLNRLGDLNVAVCAEGFDDAVEERIINEEYKIWKKNTPFLYDL
VMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFD
ASHYDNEKGEFGGFGSVSGKIEIEIKINHEGEVNRARFMPQNPCVIATKTPSSDVLVFDY
TKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEN
RVIDAKTIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTA
EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILA
SSGTDRRLHVWDLSKIGEEQSSEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS
EDNIMQVWQMAENIYNDEEPETPGSEIETGGS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaccaaatgaaattgaaatgattgaaccaaatgaaattgaaatgattgaatca
aacgagattgaagtgattgaattgaattctaataaagatataccgattactggaagtgct
gaattgaatataagcaatagtgagaaaactgtaaatctgaggactgagattacaagaact
gaatttaatatgattgcaaaagtagaggacaatatgtcggagaagtccataaacttaaat
agactaggcgatttaaacgtcgctgtttgtgcagagggctttgatgacgctgtggaggag
cgtattatcaatgaagaatataaaatatggaagaagaatacgccgtttttgtacgatctt
gtgatgacacatgccctggagtggccctctttaacggctcagtggctgcccgacgtcacc
agaccagaaggaaaagattattcgattcacaggttaatcctgggcactcatacctcggac
gaacagaatcacttgctcatcgctagtgtccaactgccgaacgaagatgcgcaatttgac
gcctcccactacgacaacgagaagggtgaatttggtggatttggttctgtgagcggcaaa
atcgagatcgagatcaagatcaatcatgagggcgaggtcaacagggcacgtttcatgccg
caaaatccgtgcgtgattgcgacgaagactccctcgagcgatgtgctcgtgtttgattat
accaaacatcccagtaaacctgatcctaatggggaatgtcatccggatttaagattgcga
ggacaccaaaaggaaggctatggtttgtcatggaacccaaacctcaatggatatttgctt
agcgcgtctgacgatcacacaatttgtttatgggatatcaacgccacaccaaaggagaat
cgcgttattgatgcgaaaactatctttacgggacatacggctgtggttgaggatgtcgct
tggcatctattacatgaatccttgtttggttctgtcgctgatgatcaaaaactcatgatc
tgggacactagatgcaacaataccagtaaaccaagtcatactgttgatgctcacactgct
gaagtaaactgcctgagtttcaatccgtattccgaattcatcctggccactggcagtgcg
gataagactgtagcgctttgggatctgcgaaatcttaagttgaagttgcattcattcgag
tcgcacaaagatgagattttccaggttcaatggtcaccacataatgaaacgatattggca
agcagtggtacagacagacggttacatgtctgggatcttagcaagattggcgaagaacag
tctagcgaagatgccgaggatggaccacccgaacttttgtttatacatggaggtcatacc
gcaaaaatcagcgacttttcgtggaatccgaacgaaccatgggtcatatgctcagtatcg
gaggacaacataatgcaagtgtggcaaatggcggagaatatttacaatgatgaggaaccc
gaaacacctggaagcgagatcgaaactggcggatcataa
DBGET
integrated database retrieval system
