KEGG   Monomorium pharaonis (pharaoh ant): 105833172
Entry
105833172         CDS       T05760                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
mpha  Monomorium pharaonis (pharaoh ant)
Pathway
mpha04140  Autophagy - animal
mpha04142  Lysosome biogenesis
mpha04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:mpha00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    105833172
   04140 Autophagy - animal
    105833172
   04148 Efferocytosis
    105833172
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mpha04131]
    105833172
Membrane trafficking [BR:mpha04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    105833172
SSDB
Motif
Pfam: TPR_Vps41 Beta-prop_Vps41 Clathrin WD40_CDC20-Fz Beta-prop_THOC3 WD40 zf_RING_Vps8_fungal WD40_Prp19 VPS18_solenoid_2nd WD40_WDHD1_1st Beta-prop_WDR5 Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_WDR3_1st TPR_7 WDR55 Beta-prop_EML_2 zf-RING_Vps41 Vps39_1 Beta-prop_RIG_2nd zf-RING_5 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd ANAPC4_WD40 TPR_2 TPR_YpiA VPS18_RING_C Beta-prop_WDR90_POC16_2nd zf-RING_2
Other DBs
NCBI-GeneID: 105833172
NCBI-ProteinID: XP_036143691
LinkDB
Position
5:17638858..17683339
AA seq 852 aa
MESTSSKNEQTTNQEDSDSSEMDEIEPRLKYVRIRNDLEHILQNDAASCIAIHPKFLCLG
SHWGMIHLLDHQGNNIKSKMLQAHTVAVNQISIDYNGDFIASCSDDGKVFIYGLYSTENN
HNMSMGRLVKSIAIDPNYKSSSGRRFITGDDKLVLYEKTFLARMKPTVLCEAEGGVRSIA
WSGRFVAWASDTGVRVYDLDARCSLGLIKWSCTTEASPEHYRCNLQWSDDKTLLIGWVDI
VRICHIRKRTMQEMVNRDLPEFVVDPVSTFQVDFYISGIAPLKNQLVLLGCLKEPDEDGK
NHRPTLHVIEPKYQDFSVICANSLTLRGYKEYSCNDYHLDCLKEENRKIIYRFFIVSPKD
IVVASLYDTDDRIEWLLSHGKFEQALEAITTNNGKDCKRHAVLDVGRIYLDHLLACEKYD
EAGKLCLKILGRDKKLWEEEVYKFARVHQLRSISPYLPRGDIILDPLIYEMVLYEYLKMD
PDGFLQLVKEWSPNLYTVAAVVNGVLEHLLVHNQRQNVLLEALAILYIHDGKYDKALAMY
LKLRHKDVFQLIQKYQLYNSVYDMIEGLMDLDTERAIQFFLEKDRVPSDVVVQKLQHNYR
YLYLYLDALDKRDTKDSKGKYHGLLVRLYADYSRDKLLPLLRRSDNYPIQQALDICSQRR
FYPEMVYLLGRIGNTSEALALMTRELNDMESAIAFCQEHDDEELWNDLVNYSLDKPAAIT
FLLQKIGTYVDPRVMVQRIEPTLEIPGLKKALVKMMCDYNLQVSVQEGCKKILSNDYFNL
HERLVRCHQKGIFVDDDQMCGACHRKIIVREPRNMVAFYCKHCFHEDCLPNFNLVENCVI
CNSQKEMTPNRK
NT seq 2559 nt   +upstreamnt  +downstreamnt
atggaatcgacgtctagcaagaatgaacagaccaccaatcaggaagattcagattcctcg
gaaatggatgagatagaacctagattgaagtatgtgagaatacgcaatgatttggaacat
atcctgcaaaatgatgcagctagttgcattgctatacatccaaagtttctttgtctagga
tcacattggggaatgattcaccttctagatcatcagggaaataatataaagtctaaaatg
ctacaggcacacacagtagcggtcaatcagatatcaatagattataacggagactttatc
gcctcttgcagcgatgatggaaaggtttttatttatggattatacagtaccgaaaacaat
cataatatgagcatgggtagactagtcaagagtatagcgattgacccgaattataagagt
agcagtggcagaagatttattacaggtgatgacaagcttgtgctttacgagaaaaccttt
ctagccagaatgaaaccaacggtactctgtgaagcagagggtggagtcagatccattgcg
tggtctggtcgctttgttgcgtgggcttctgacaccggtgtgagagtctatgatctcgat
gctagatgttcattaggacttattaagtggtcctgtaccacagaggcatcaccagaacat
tatcgatgtaatttacaatggtcagatgataaaacgctgttaatcggatgggtggatatt
gtgcgaatttgtcatattagaaaacgcacaatgcaagaaatggtcaatcgagatttgcct
gaatttgtagtggatccagtatcgacattccaagtagatttttatatatccggtatagca
ccattgaagaatcagttagtattattggggtgtttaaaggaaccagatgaagatggaaaa
aatcatcgtccgactctacatgtgattgaaccaaaatatcaagatttctcagtaatatgt
gcaaattcacttactttacgcggttataaggaatatagctgcaatgattaccatttagat
tgcttaaaggaggaaaacaggaaaattatttacagattttttattgtaagtccgaaagat
atcgtagtggctagtttgtatgatacagatgacagaatcgaatggctattgagccatgga
aaatttgagcaagctttggaagctataacgacaaacaatggcaaagattgcaagaggcac
gccgtattagacgtggggcgtatttatttggatcacttattagcatgtgaaaagtacgat
gaggctggaaaactttgtcttaaaattttaggaagggataaaaaattatgggaagaagag
gtttacaaatttgccagagtacatcaattgcgttcaatttcgccctacctgcctcgaggt
gatattattctcgatccgctaatctatgaaatggtactgtatgaatatctcaaaatggat
cctgatggtttcttgcaattggtcaaggaatggtctccaaatttgtacacggtggcagca
gtggttaacggcgtattggagcatttgctggttcataatcaacgacagaacgtgttatta
gaagcgttagccattttatacatccacgatggaaaatatgataaagcacttgctatgtat
ctgaagctgcggcataaggatgtcttccagttgattcaaaaatatcagttgtataattcg
gtatacgacatgatcgaaggtttaatggatttagatacggaacgtgccatacaatttttt
ttagagaaggatagagtgccatctgacgtggttgtacaaaagttgcaacataattatcgt
tatttatatttgtatctagatgcattagataagagagatacaaaggattcgaagggaaag
taccatggtcttctggtacgattgtatgccgattattcgagagacaagttattgccgctt
ttacgtcgttccgataattatccaatacaacaggctttggatatttgtagtcagcgccga
ttttatccagaaatggtatatctgttaggccgaatcggaaacacttcggaagctttggcg
ctcatgacgagagagctcaacgatatggaaagtgcaattgcattttgccaggaacatgac
gacgaagagttgtggaatgatttagttaattactcacttgacaaacctgcggctattaca
ttccttcttcaaaagattggcacctatgttgatcctagggttatggtacaaagaatagaa
cctactttggaaattccaggcttaaaaaaagcattggttaaaatgatgtgcgactacaat
ctgcaggtgtctgtgcaggaaggttgcaaaaaaatattgtctaatgattatttcaatctt
catgaaagacttgttcgttgtcatcaaaagggcatatttgtcgatgatgatcaaatgtgt
ggagcttgccataggaagataattgtaagagagccgcggaatatggttgcattttattgt
aagcattgttttcacgaagattgtctacctaattttaatttggttgaaaattgtgtgata
tgtaattcacaaaaagaaatgacgcctaatagaaaatga

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