Monomorium pharaonis (pharaoh ant): 105833267
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Entry
105833267 CDS
T05760
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit CG7185 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03015
mRNA surveillance pathway
mpha03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105833267
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105833267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105833267
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
105833267
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
105833267
NCBI-ProteinID:
XP_012530325
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Position
11:complement(12645027..12669440)
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AA seq
785 aa
AA seq
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MADGDIDLYADDLEQDFAQDEFAGDGVDLYDDVIAAPAGGNGGVSSGNAGEGGGDTTSPN
EETNGNAPYHQLGNNIQPNQIGRRHQLYVGNLTWWTSDQDITDAVQSIGVTDFVEVKFFE
NRANGQSKGFCVISLGSEQSMRICMDRLPKKELHGQNPVVTFPTKQALNQFESQCKTRPA
PAPQQSQSQRPHNPHQHQPPMPPHQQHPQHPQHPQHSQQNHGPRMMMGPPQGVRPQRMPP
PGMGPPGPGGPSQQGPPRMHGPPLGPGPGPHHPLPGHPNQGPPPAYQQGPWNGPRPNGPP
GPPRGPSGPGGPPQQGPPGPGPGQHRPGMSCTRDLSEANYHMPQQFHGGPPGPPGQGPPR
GPPGHPGGPPGDPRGAQPRPEWNRPPGMHHGPQGPPGFPQHQHMQGPQPGQGPPQRGPPP
GSMGGPGGPPPGHGGPPQGPPQGLPGGPAPHVNPAFFPQGPPHQHPGQHPPGPPGPPHGP
PHGPPHGPHGPPHGPPHGQSHGPPHVPPHGYGPPSAQAPYGAPGPDHRPEGPPPLTEQEF
EEIMGRNRTVSSSAIARAVSDAAAGEYASAIETLVTAISLIKQSKVAADDRCKILISSLQ
DTLRGVETKSYGSGRRERSRSRDRERSHRRRRERSRSRDREYRERSRDRERERDRERDRE
RERDRDRDRERYYSEPYPRERSRSRERDRERERDREYRERSREESTTRQSARPRVKEEPP
ETTPVSSSKATRYYDDRYRERERDRERESSRRPTEREREPERERERERERDRRDERADSS
HRSRH
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtgacattgatttgtacgccgacgatctcgagcaagatttcgcgcaggat
gaatttgctggagacggtgttgatctttatgacgacgtgattgccgctccagcgggtggt
aatggtggcgtctcttccgggaatgctggggagggtggtggtgacaccacatctccaaat
gaggagactaatgggaacgcaccttaccatcagctcggcaataacatacagccgaatcaa
attggtagacgacaccagttatatgttggcaacttaacatggtggacaagtgatcaagat
ataacggatgctgttcaaagcatcggtgtgactgattttgtggaggtaaaattctttgag
aaccgtgccaacggtcagtccaaaggtttctgtgtgatatcattgggctcggaacagagt
atgcgaatatgcatggataggctgcctaagaaggaactgcacggacagaatcctgtagta
actttccctaccaaacaagctctcaatcaatttgaatcgcagtgtaagacgcgacccgct
ccggctccgcaacagagtcagagccaacgtcctcataatccacatcaacatcagccacca
atgccacctcatcaacagcatccccaacaccctcaacatcctcaacattcacaacaaaat
catggtcctagaatgatgatgggtcctccacagggtgtaagaccgcaaaggatgccgccg
cctggaatgggtccgccaggtcccggcggaccaagtcaacagggtccgccgcgtatgcat
ggcccgccattggggccaggcccaggaccgcatcatccattgcctggtcatcctaatcaa
ggcccgccacctgcttatcaacagggaccgtggaatggaccacgtccgaatggtcctccg
ggaccacctcgaggacccagtggacctggaggtccacctcagcaaggtccaccaggaccg
ggtcctggccaacatagacctggaatgagttgcactagagacctttcagaagctaattat
catatgccacagcaatttcatggtggtccgcctggaccacccggtcagggacctccacgt
ggcccacctggacatcctggtggacctccaggggatcccagaggagcgcaacctcgtccc
gaatggaatagaccaccaggaatgcatcatgggcctcagggaccaccaggtttccctcaa
catcaacatatgcaagggccgcagcctggccaaggcccaccacagagaggacctcctcca
ggttctatgggtggtccaggcggaccgcctccgggacacggtggaccaccccaaggccct
cctcaaggcctaccaggtggtccagcacctcatgttaatcctgcattctttccacaagga
ccacctcatcaacatcctggacaacatccaccgggtcctcctggcccacctcatggtcca
ccacatgggccgcctcatggtcctcacggtcctcctcacggtcctcctcatggacaatcg
catggaccaccacatgtaccgccacatggttatggaccaccaagtgcacaagccccttac
ggagcacccgggcctgatcatcgcccggaaggtccaccgccactcactgagcaagaattt
gaagaaataatgggtcgtaatcgtacggtatcctcgtccgcaattgcgcgggcagtttcc
gatgccgcggcaggcgaatatgcaagtgccatagagacgttggttactgccatctctctg
ataaaacagtccaaggtagctgcagatgatagatgtaagatattaatcagttctctgcaa
gacactttgcgtggtgtcgagaccaagagctatggatctggacgtagagagcgttcacgt
tcgcgtgacagagaacgcagtcatagaagacgacgtgaacgatccaggagtcgtgatcgt
gaatatcgtgaacgtagcagagaccgagagcgagaacgtgaccgggagcgtgatcgcgag
agagaaagagatcgtgatagggacagggagcgctattacagcgaaccatatccaagagaa
cgttcacgcagccgggaaagagatcgcgaacgtgaaagagatcgtgaatatagagagcga
agcagagaagaaagtacaacacgtcaatcagccaggccaagagtaaaagaagaaccgcca
gagacgacacccgtctcgtcttccaaggcgactaggtattatgacgatcgctacagagag
cgcgagcgagatcgagagcgagaatcgagccgaagaccaaccgagcgggagcgggaaccg
gaacgggaacgtgaacgggaacgagagcgagatcgtcgagatgaacgggcagactcttca
catcgctcaagacattag
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