Monomorium pharaonis (pharaoh ant): 105833335
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Entry
105833335 CDS
T05760
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105833335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mpha03041
]
105833335
Enzymes [BR:
mpha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105833335
Spliceosome [BR:
mpha03041
]
Complex C
Other components
Step II factors
105833335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
AAA_30
AAA_16
PhoH
Snu56_snRNP
Motif
Other DBs
NCBI-GeneID:
105833335
NCBI-ProteinID:
XP_012530454
LinkDB
All DBs
Position
3:complement(14386349..14391988)
Genome browser
AA seq
1207 aa
AA seq
DB search
MEEVTKLEHLSLVSKICTELENHLGLNDKDLAEFIVHLAEKNNTFPAFKKVLIENGAEFS
DSFMANLLRIIQHMKPTKASTDKPSKSISKQDELALKFPALALPNENPRDSETNDAKDED
IVNDVMASLEAFAPSNKKKSTNTEKNNGKLDSDEKKSKRGRRSRSRSRDRSKRHRSRSRS
SNRKERRHRSRTRSRSRTRHRSRDRTHRRRSRSRERRGSPGARDRRDARHSRKRDRSRSR
STEEIPLSAEPEVGKIYAGKVANIVPFGCFVQLEGLRRRWEGLVHISQLRREGRVANASD
VVSRGQKVLVKVLSVGGQKVSLSMKDVDQETGKDLNPVIPIAKADEDEKHLRNPDRPTSL
LELQGNYDEDETYSRKRVQRLSSPEKWEIKQMLAASCIDRSELPEFDTETGILPREDDEE
EDVEIELVEEEPPFLHGHGRTLGDLSPVRIVKNPDGSLAQAAMMQSALAKERREQKMLQR
EQEMDSVPTGLNKNWIDPLPDAESRTLAANMRGIGLQTQDLPEWKKHVIGGKKSSFGKKT
NLTLLEQRQSLPIYKLRDDLVKAVTDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIG
CTQPRRVAAMSVAKRVAEEFGCCLGQEVGYTIRFEDCTGPETSIKYMTDGMLLRECLMDL
DLKTYSVIMLDEAHERTIHTDVLFGLLKQAVGRRPDLKLIVTSATLDAVKFSQYFFEAPI
FTIPGRTFEVEVMYTKEPETDYLDAALITVMQIHLREPPGDILLFLTGQEEIDTACEILY
ERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYV
VDPGFVKQKVYNSKTGMDSLIVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAYRDEMLP
TPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLIMALESLHSLSALDNEGLLT
RLGRRMAEFPLEPNLSKMLIMSVHLQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAK
FNQPEGDHLTLLAVYNSWKNNKLSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVV
SAGKNTVRIQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHEL
VQTTKEYMREVTTIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRIS
RVRRRRN
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagttacgaagctggaacacctgtctctggtgtcgaaaatctgcacggagttg
gagaatcacctgggattgaacgacaaggacttggctgagttcattgtacatctggccgaa
aaaaataacacatttcccgcgttcaagaaggtactaattgagaacggagcggagttctcc
gactcctttatggccaatcttctcaggataatacagcacatgaaaccgacgaaagcgtcc
accgacaaaccgtccaagtctataagcaagcaggacgaattagcattgaagtttccagcg
cttgcgttaccaaatgaaaatccacgtgattccgagaccaacgacgccaaggatgaggac
atcgtcaatgatgttatggcttccctagaagcgttcgcgccgtctaataagaaaaagtcg
acgaacaccgagaagaataacggtaagcttgacagtgacgagaaaaagagtaaacgagga
aggagaagcaggagcagatcgagggacagatccaaacgacacagatccagatccagatca
tcgaatcggaaggagagacggcacagatctaggacgcggtccaggtcgcggacgcgtcac
agatcgcgcgaccgaacgcacagaagacgctccaggtcccgggagcgcaggggctcaccc
ggagcccgcgatcgcagagacgcgagacactcgaggaaacgcgaccgatccagatccaga
tccacggaggagattccactctccgcagagccggaggtgggtaagatttacgccggcaag
gtcgcaaacattgtgccgttcggctgttttgtccagctggaaggtttaaggcgtcgttgg
gagggcctggttcatatctctcaattgagacgggaaggccgagtggcgaacgcgagcgac
gtggtctcccgggggcagaaggtcctagtgaaggtcctcagcgtcggtgggcagaaggtg
tctctcagcatgaaggacgtcgatcaggaaactggaaaggatttaaatccagtgataccg
atcgcgaaggcggacgaggacgagaagcacttgcgtaatccggacagacctacctctctg
ctggagcttcagggtaactacgacgaggacgagacgtattcgaggaagcgcgtgcaacgt
ctctcgtcgccagagaagtgggagatcaagcagatgctggccgcgtcgtgcatcgacaga
agtgagttgccggagttcgacacggagactggaatcctgccacgagaggatgacgaagag
gaggacgtagagatcgagcttgtcgaagaggagccaccgttcctgcatggtcacggccga
actctcggcgacctcagccccgtgaggatagtaaagaatccggacggctcgctagcgcag
gcggcgatgatgcagagcgctctggcaaaggagcggagagaacagaagatgttgcagcgc
gagcaggagatggattccgtgcccactggtctgaacaagaactggatagacccactgcca
gacgcagagagtcgcacgctggcggcaaacatgcgcggcatcggtttacagacgcaggat
ctgcccgagtggaagaagcacgtgataggcggtaagaagtcgtcgttcggcaagaagacc
aatttaacgctattggagcagcgtcagagcttgccgatttacaagctgcgcgacgatttg
gtgaaagccgtgacggacaatcaaatcttgatcgtaatcggggagaccggctcgggcaag
acgacgcagatcacgcagtacctggcggaggctggtttcaccgcgcgcggcaaaatcggt
tgcacacagccaagacgtgttgccgctatgagcgtggctaagagagtggcagaggagttt
ggctgctgtttgggccaggaagtgggctataccatccgttttgaagattgcaccgggccg
gagaccagcatcaaatatatgacggacggtatgttgctgcgtgaatgcttgatggacctt
gacttgaaaacgtattcggtaattatgttggacgaggcgcacgagcgcacgatacacacg
gatgtgctgttcggcctattgaagcaggcagtgggtcgtagacctgatctcaagctgatc
gtcaccagcgctactctagatgcggttaaattctcgcagtacttctttgaggcgccgatt
tttaccatacccggccgtacattcgaggtcgaggtaatgtacacgaaggaaccagagact
gattacctggatgccgcattgatcaccgttatgcagatccatctgcgtgaaccgccaggt
gacatcctacttttccttactggtcaggaggagattgataccgcctgcgagatcctttac
gaacgtatgaagtctctgggtccggacgtaccagaactaattattcttccggtttactcg
gctttgccctcagagatgcaaactagaatatttgaaccagcgccgcctggctcacgcaaa
gtcgtcattgccacgaacatcgccgaaaccagcttgacgatcgacggtatatattacgtc
gtcgatccgggctttgttaaacagaaagtctacaattccaagacaggcatggacagtctt
atagtgacgccgattagccaagcggcggcaaaacagagaagcggaagagccggcagaacc
ggaccaggaaagtgttatcgtctttacaccgagcgagcttatagagacgaaatgctgccc
acgccagtcccggagatacagcgtacgaatttggccactactgtgttgcaactgaagact
atgggcatcaatgatcttctacattttgattttatggatgcgccaccagtggaatcactg
attatggcattggaatcgttgcacagcttaagcgctctcgacaatgagggcttactgacg
cgattgggtcgacgtatggcggaatttccgctagaaccaaatctatcaaaaatgttaatt
atgagcgtgcaccttcagtgctctgatgagattctgactatcgtcagtatgttgtccgta
caaaatgtcttctatcgaccgaaggacaaacaggccttagccgatcagaagaaagcaaag
ttcaatcaacctgagggtgatcacttgactctactagcggtttataattcatggaaaaac
aataagctgagcaatgcttggtgttacgagaactttgtgcagataaggacattgaagcgt
gcccaagatgtacgtaagcaattgctgggcataatggacaggcataaattagatgtagta
tcggccggtaagaacacagtgcgtatacagaaagctgtgtgctctggatttttcagaaat
gcggcgaagaaagatccacaggagggatacagaacgttggttgacagccaagtggtgtac
attcatccgagtagtgcattgttcaatcgccagccggaatgggtgatctatcacgaattg
gtgcaaactaccaaggaatatatgagagaagtgacgacgattgatccgaagtggctggtg
gaatttgcacctgcattcttcaagttcagcgatccaactaaacttagcaagtttaaaaag
aatcaaagactggagccactctacaacaaatacgaagagccgaacgcgtggaggatatcg
cgagttcgcaggcgacgtaactaa
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