Monomorium pharaonis (pharaoh ant): 105834180
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Entry
105834180 CDS
T05760
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03022
Basal transcription factors
mpha03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105834180
09124 Replication and repair
03420 Nucleotide excision repair
105834180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpha03021
]
105834180
03400 DNA repair and recombination proteins [BR:
mpha03400
]
105834180
Enzymes [BR:
mpha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105834180
Transcription machinery [BR:
mpha03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105834180
DNA repair and recombination proteins [BR:
mpha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105834180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
SWI2_SNF2
TniB
Motif
Other DBs
NCBI-GeneID:
105834180
NCBI-ProteinID:
XP_012531925
LinkDB
All DBs
Position
Unknown
AA seq
793 aa
AA seq
DB search
MGPPKRFKKDNGKWKKRKDDYDEYNDDDSIDSNEADGVPDAAKNDVEKQDECAIEDEFGA
KDYRSQMILKSDCSSRPLWVAPNGHIFLESFSPVYKHAHDFLIAISEPVCRPEHIHEYKL
TAYSLYAAVSVGLQTQDIIEYLKRLSKTSIPDGIIEFIKLCTLSYGKVKLVLKHNKYFIE
SPFPEVLQRLLKDPVIQECRLRKLAEDTETDDIVTNVQVKIKVPQFGSKALINTSVPSKT
NSETESDQILTETATIPEDITAFYDKIDKEDEDEEDQELKTVSFEVNQEKIEVIQKRCIE
LEHPLLAEYDFRNDSVNPDINIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGK
SLVGVTACCTVRKRALVLCNSGVSVEQWKQQFKMWSTADDSMICRFTSEAKDKPMGCGIL
ITTYSMITHTQKRSWEAEQTMRWLQEQEWGIMVLDEVHTIPAKMFRRVLTIVQSHCKLGL
TATLLREDDKIADLNFLIGPKLYEANWLELQKRGFIARVQCAEVWCPMTPEFYREYLACK
MSRKLLLYVMNPNKFRCCQYLIRYHERRGDKTIVFSDNVFALKHYAIKMNKPYIYGPTSQ
SERIQILQNFKFNMKVNTIFVSKVADTSFDLPEANVLIQISSHGGSRRQEAQRLGRILRA
KKGAIAEEYNAFFYTLVSQDTMEMNYSRKRQRFLVNQGYAYKVITKLAGMDEEPDLMYGN
REEQGQLLQQVLTASDTDADEERIPGEGPRPIVRKAGTMISMSGADDAIYYEYKKAPGSS
TANKHPLFKKFRT
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgggtccaccaaagcgtttcaaaaaagataacggtaaatggaaaaagcgtaaggacgat
tatgatgaatacaatgatgatgattcgatagatagcaatgaagcagacggtgtaccagat
gcggcaaaaaatgatgtagaaaaacaagatgagtgtgctatcgaggatgaatttggagca
aaagattatcggtcacaaatgattttaaaatcagattgttcatctagaccattatgggtg
gcaccaaatggacatatttttttggaatccttttctcctgtgtataaacatgctcatgat
tttttaatagctatatcagaacctgtatgtcggccagagcacattcatgaatataaacta
accgcatattcactttatgctgctgttagcgtaggcctacaaacgcaagatataatagag
tatctaaagagattaagtaaaaccagtattcctgatggtataatcgaatttatcaaactg
tgtacgttgtcctatgggaaagttaaacttgttttaaaacataataaatactttattgaa
tcgccatttcctgaagtgctgcaaagattattaaaagatccagtaattcaagaatgtcga
ctgagaaagcttgcagaagatacagaaactgatgatattgttacaaatgttcaagttaaa
ataaaagttcctcagtttggatcaaaagcacttataaatacgtctgtgcctagtaaaacg
aattcagagactgaatctgatcaaatattaacggaaacagctaccattccagaagatata
actgctttttacgataaaattgacaaggaggatgaagacgaggaagatcaagaattaaaa
acagttagctttgaagtgaatcaggagaaaattgaagttatacaaaaacggtgtattgaa
ttggagcatcctttattggcggaatatgattttcgtaatgatagtgtaaatcctgatata
aatattgacttgaagccatcagctgtattaagaccttatcaagagaaaagtttgcgaaaa
atgtttggtaatggacgtgctagatcaggagtaatagttttaccttgtggcgctggtaag
agtttagttggagttacagcttgctgtacagtacgtaaacgtgccctagtattatgcaac
tctggtgtatctgtggaacaatggaagcagcaatttaaaatgtggtccactgccgacgat
tcaatgatctgccgttttactagtgaagcgaaggataaaccaatgggttgtggaatatta
ataactacatattctatgatcacacacactcagaaacgttcgtgggaagctgagcaaaca
atgcgttggcttcaagaacaggaatggggtattatggtcttggatgaggtgcatactatt
cctgcgaaaatgttccgcagagtattaacaatcgttcagtctcattgtaagttgggatta
acggctacgcttttgcgagaggatgacaaaattgctgatttgaattttttaattggacct
aaattatacgaggctaattggttagaattgcaaaaaagaggatttattgcaagagtacaa
tgtgcggaagtttggtgtcctatgacaccagaattttacagagaatatcttgcttgcaag
atgagcagaaaactgttattgtatgtgatgaatccaaataaatttcgttgttgccaatat
ttaattcgatatcacgagagacgtggcgataaaaccattgtcttctccgacaatgtattt
gcattgaaacattatgctattaaaatgaataagccatatatttatgggcctactagtcag
agtgaaaggatacaaattttgcaaaattttaaatttaatatgaaagtgaatacaatattt
gtcagcaaagtagcagatacttcttttgatttaccagaggctaatgtcttaattcaaatc
tcatcccatggtgggtccagaaggcaagaagcacaacgattagggcgtattcttagggct
aaaaaaggtgcaattgcggaggaatacaatgcgttcttttatacgctcgtatcacaagat
acaatggaaatgaattattcaagaaagcgtcaacggtttcttgtgaatcaaggttatgcc
tacaaagtcatcacaaaacttgcaggcatggatgaggagccagatttaatgtatggaaat
cgagaagaacagggtcaattattgcagcaagtattaacagctagcgacacagatgcagat
gaggaaagaatacctggtgaagggccaagaccgattgtacgtaaagctggcacgatgata
tcgatgtcaggagcggatgatgctatttattatgaatataaaaaagctcctggctcatcg
acggcaaataaacatcctctttttaaaaaatttagaacataa
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