Monomorium pharaonis (pharaoh ant): 105834329
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Entry
105834329 CDS
T05760
Name
(RefSeq) transcription factor Sox-19b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpha03000
]
105834329
Transcription factors [BR:
mpha03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105834329
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Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
DUF8737
Motif
Other DBs
NCBI-GeneID:
105834329
NCBI-ProteinID:
XP_012532179
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Position
5:25665962..25708318
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AA seq
392 aa
AA seq
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MRAGGNMCDGSFTETLRTMQGMSTSTPALPGGSAGVGHMGVGLGSPLGSAGKKMQGEHIK
RPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDQAKRLRAQHM
KEHPDYKYRPRRKPKTLRKEGYPYSIPYPSVPMEALRAGMAGGMGQAGMGSYYTPAAAYG
SLSAASMAAAAAAAAQQSAAMSGLAAPAQVVGSMDAMKYSMEADKYRAAYMPPSTLTMSM
YSDPKYLDSSNSKAYLDRTYLDAKAYFEGVQQSKLYMDQKPIAEYNRPSYEPNKLYEESS
PGSVVGGSGPTRSPPAESPDTSKQHERTEQGSSSASSTSTSSAASPGATLPAYYPGSVQA
GGLLGPQMGQYGGYQMAPAPGNESFRRPLVIL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgagagccggcggcaacatgtgcgacgggtccttcacagaaactctgcgcactatgcaa
ggaatgagtacgtcgacaccggcactacccggtggtagcgccggtgtcggtcacatggga
gtcggccttggtagcccacttggttcagcaggcaagaagatgcaaggagagcacatcaaa
cggccaatgaacgccttcatggtctggtcacgtctacaacgacggaaaattgcacaagag
aatccgaaaatgcataacagtgaaatctccaagagacttggtgcagaatggaagcttctt
acggaggatgagaaacgcccgttcattgatcaggcgaagaggttacgtgcgcaacacatg
aaagaacaccctgactacaagtacagaccgcgaagaaagcccaagactttgcggaaagag
ggttatccttatagcattccatatccaagtgttcccatggaagctcttcgggccgggatg
gccggtggcatgggacaggctgggatgggttcctattacacccctgccgcggcttatggc
tcactctcggcagccagcatggctgcagccgccgccgcggctgcacaacagtctgccgcc
atgtctggtctcgcggcacctgctcaagtagtaggctcaatggacgccatgaagtattca
atggaagctgataaatatcgcgccgcctatatgccgcccagcactctaacaatgagcatg
tattcggatcccaagtacctggattcctccaattccaaggcttatctggatcgcacctac
ttagatgcaaaggcatacttcgaaggcgtgcaacagtcgaagctgtacatggatcagaaa
ccgattgcggagtacaatcggcccagctacgagcccaacaagctctacgaggagtccagt
ccgggtagcgtcgtcggcggaagtggaccgacgaggtcgccgcccgcagagtcaccagat
accagcaagcaacacgaaaggacggaacagggctcgtccagcgcgagctcaacatcgacg
tcatcggccgcgagccccggcgcgactctgccagcgtattatcccggatcagttcaagcc
ggcggcttgctcggcccgcaaatgggccagtacggtggataccaaatggcaccggcacca
ggaaatgaatcttttcggcggccgttggttatcttgtga
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