Monomorium pharaonis (pharaoh ant): 105834656
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Entry
105834656 CDS
T05760
Name
(RefSeq) putative ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105834656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105834656
03036 Chromosome and associated proteins [BR:
mpha03036
]
105834656
Enzymes [BR:
mpha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105834656
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
105834656
mRNA degradation factors
5'-3' decay
Decapping complex
105834656
Chromosome and associated proteins [BR:
mpha03036
]
Eukaryotic type
Gene silencing
piRNA pathway
105834656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA
Motif
Other DBs
NCBI-GeneID:
105834656
NCBI-ProteinID:
XP_012532762
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MMTETHMNSNHMLNSGLSTKSEIDKMDDVGWKAKLKIPPKDKRIKTSDVTDTRGNEFEEF
CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDILARAKNGTGKTGAYSIPVLEQVDPR
KDVIQALVIVPTRELALQTSQICIELAKHMDIKVMVTTGGTNLRDDIMRIYQKVQVIIAT
PGRILDLMDKNVANMEHCKILVLDEADKLLSQDFKGMLDHVISRLPHERQILLYSATFPL
TVKQFMEKHLRDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQITQSIIFCN
STQRVELLAKKITDLGYCCYYIHAKMAQAHRNRVFHDFRAGLCRNLVSSDLFTRGIDVQA
VNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYEDRFNLHRIEQELGTEIKPIPK
VIDPSLYVARSEDNNSMEEGNVSK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgagacgcatatgaactctaatcatatgttaaattctggtttgtccaccaaa
tcagagatagataaaatggatgatgtaggttggaaagccaaattaaaaattccaccaaag
gataaaagaattaagacaagtgatgttactgacacacgtggtaacgagtttgaagaattt
tgcctaaaacgtgaattattgatggggatttttgagaagggatgggagaagccatcacca
atccaagaagctagtattcccattgcactttctggtaaggacatcttggcacgagcgaaa
aatggaactggtaaaactggagcgtattcaattccagtgttggagcaggttgatccaaga
aaagatgtaatccaagcactggtaattgtgcctacaagagagttagcgctacaaacatca
cagatttgtattgagctcgcaaaacacatggatataaaagttatggttactactggagga
actaacttacgagacgatattatgaggatttatcaaaaagtacaagtaataatcgcaacg
ccaggaaggatccttgatctgatggataagaatgtagcaaatatggagcattgtaaaatt
ctagttttggacgaagcggacaaactgctgtcacaagacttcaagggaatgttggatcat
gtaatatcgagattaccacacgaacgtcagattttgctgtattcagctacgtttcctctg
actgtgaaacaatttatggaaaaacacttgagagatccatatgagattaatttaatggaa
gagttgacattaaaaggcgtaacacaatattacgcttttgtacaggaacgacaaaaagtt
cactgccttaacacgttattctccaagttgcaaataacgcaaagcataatcttctgtaat
tcaacgcaacgcgtcgaattgttggctaaaaaaataacagaccttgggtattgctgttat
tatatacacgcgaaaatggcgcaggcacaccgaaatcgcgtattccatgattttcgtgca
ggattatgccgaaatctcgtgagcagtgatctatttactcgcggtattgatgttcaagct
gtgaatgtcgtaatcaattttgactttccgaagatggcagagacatatctgcatcgaatc
ggccgatctggaagattcggccatttaggtatagcaattaacctaatcacgtatgaagat
cgcttcaacctacatcgtatcgaacaggagcttggaacagaaattaaacctatcccaaag
gtgatagaccctagtttgtacgtcgcgagatcggaagacaataatagtatggaagaaggc
aacgtgtccaagtag
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