Monomorium pharaonis (pharaoh ant): 105834671
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Entry
105834671 CDS
T05760
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha04140
Autophagy - animal
mpha04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105834671
04148 Efferocytosis
105834671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpha04131
]
105834671
Membrane trafficking [BR:
mpha04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105834671
Hops complex
105834671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
TPR_Vps41
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf-RING_16
zf_RING_Vps8
zf-RING_2
zf-C3HC4
zf_RING_Vps8_fungal
zf-C3H2C3
zf-RING_Vps41
zf-RING_UBOX
zf-rbx1
COMP
Motif
Other DBs
NCBI-GeneID:
105834671
NCBI-ProteinID:
XP_036142576
LinkDB
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Position
5:23578965..23594333
Genome browser
AA seq
1000 aa
AA seq
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MTSMFDQYEQASQRSKQVLAPPIRPDISTAGFIQMKLQDDGPIFTKQKVNFLPSDKILYL
VVSSNTIVIAMANNILLRIDMKQPDKTEEIDISKYALSMKISSLFLDPLGHHLLITLVPK
HGDNPPPELFYLHRKTTKLKQAGKFKGHEITAVGWNFSNISETNTGPILLGTAKGLIFET
EIGLETEKIFNTSLEQYWRQLPNYLPLYGSKEAGGLVFDIGKNSKPPITGLEFHKIPNSD
KYVIIVTTLMRIYQYIGAIGNPEEKPLLQQVFYRYLNAQETFNEVINSLPYSKMQFYYPS
LGILPKSFGWLTEAGILYAQVDAKPDTNNVLINQRMLTCPETSLMGSNVPRTISMPLSFV
LTEFHALLLYPDHVKGISLLNQELIFEDIYNDAVGKLIGITKDPATRSIWAFSERAVFKY
KVTKEDRNVWQVYVDKGEFELAKQYCKDNPAHIDQVLVKQAEMLFKNKEYEKSALIYADT
HSSFEEVSLKFLQEWQIEALKTFLRKKLDGLKTQDKTQITMIVIWVTELFMNQMGALRSS
NTSYLHDSQYMELQKQFDSFLTIPKVEECIKRNRSTIYDLMASHGDKDNLIRLTIMHCNY
EEVIRQHLYKNNYLEALGVLKSQNNKDLFYQFAGILLQELPRPTVAVLISQGSLLKPAKL
LPALVSCDSDEKHAKEIIKYLEFCVYKQGSQEQAIHNFLLSLYARYKQDEVMRYISSQGQ
DVSMVHYDVHYALRLCQEVGLTEACVQLSALLGLWTTAVDLALTISVDLAKQIAAMPSDH
DDELRKKLWLKIAEHVVREKDDIQQAMEFLQHCDLVRIEDILPFFSDFVTIDHFKQAICN
SLQEYNQHIQDLKEEMQEATKAAELIRKDIQTFRTRCTFVHARDTCNTCEVQLLLRPFYV
FPCGHKFHSDCLVAALTPMLSMDQRTKLADLQRQLTAVSNRPEDTTSTTSVSLSTRDQIK
ADIDDLVAAECLYCGELMIESIDKPFIEEKDYERVMKEWM
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgatgtttgaccagtacgagcaagcctctcagcgttccaagcaagtgttagca
ccacctattcgtccagatattagtacagctggttttattcaaatgaagttgcaagacgat
ggcccgatatttaccaagcagaaagtcaattttctgccatctgacaaaattctttaccta
gttgtcagtagtaacactattgtgattgctatggctaataatattttgctgcgcattgac
atgaaacaacctgacaaaactgaagaaattgacatatccaagtacgcattgagcatgaaa
atatccagcctgtttctggatccgttgggtcatcatttgttgataactctggtgccgaaa
cacggggacaatccgcctccagagttgttctatctgcacaggaagacgacaaagttgaag
caagctggcaagttcaagggtcatgagattacagcagtgggctggaatttttcgaacatt
tcggaaacgaacaccggcccgattctgctgggcaccgctaagggcttgattttcgaaacg
gagattggtttggagactgagaagatttttaatacgagtctggaacaatattggcgtcag
cttccaaattatttgcctctttatggttctaaagaggcagggggattggtatttgacata
gggaagaatagtaagcctccaatcaccggactagagttccacaaaattccgaactctgat
aaatatgtgattattgtgaccactcttatgcgcatttatcaatacattggtgccattggc
aaccccgaagagaagcctcttttgcagcaagtgttctatagatacttaaacgcacaagaa
acatttaacgaggtaataaattcgttgccgtattcaaagatgcaattttattatccatcc
ctgggcatcctgccgaagtcgtttggatggctgacagaagctggtatcctatatgctcag
gtggatgcaaagccagatacaaacaacgttctgattaatcaacggatgttaacctgtccc
gaaacgagtctcatgggcagtaacgttccgcgaactatctcgatgccgttatcttttgtg
ctaactgaatttcatgcgctgctactgtacccggatcatgtaaagggcatatcgcttctg
aatcaggaattaatatttgaagatatttataacgatgcagttggtaaattgattggcatt
accaaggatccggcaacgagatcgatttgggctttcagcgagcgagctgttttcaagtat
aaagtgacgaaggaagataggaatgtttggcaggtatatgttgataaaggtgaatttgag
ttggctaagcagtattgcaaagacaacccggctcatatcgatcaagtgctcgtgaaacag
gcggaaatgctcttcaagaacaaagaatacgaaaagagtgcactaatatatgccgacacc
cattcgtctttcgaggaggtttcattgaaatttttgcaagagtggcaaatcgaagctttg
aaaacatttctgcgcaagaaactcgatggcttgaagacgcaagacaagacacagattaca
atgattgtcatttgggtgacggaactgtttatgaatcaaatgggagctctacgtagtagc
aatacgtcctatcttcatgattcacaatatatggagttgcagaagcaatttgatagcttc
ctcactattcctaaagttgaggaatgtatcaaaagaaatcgcagtactatatatgactta
atggccagtcacggggacaaagacaatctgatacgtctgacaataatgcattgcaattac
gaggaggtgatacgtcagcacctgtacaagaataactacttggaggcgcttggggtgctc
aagagtcaaaacaataaagatcttttctatcaatttgctgggatactgttacaggaattg
ccgcggcctacggtggccgtcttaatctcacaaggatcgttgttgaagccggcgaaactt
ctgccagctttggtttcgtgcgacagcgatgagaagcacgcaaaagaaattattaaatat
ttggagttttgcgtgtataagcagggttctcaagaacaagcgattcataactttcttttg
tctctgtacgcgcgttataaacaggacgaagtgatgcgatacataagctctcaaggtcag
gatgtcagtatggtgcactacgacgtacattacgcgctgcgattgtgtcaggaagtaggc
ctaacagaagcctgcgtacaactatcggctttgcttggtttatggaccactgctgtggat
ctcgcgcttacgattagtgtagatcttgctaagcagattgctgctatgccatctgatcat
gatgacgagttgagaaaaaaattgtggttaaagatagcggagcacgtagtacgagaaaaa
gatgatatacagcaagcaatggagtttttgcaacattgtgatttagtcaggatagaagat
attttaccctttttctctgatttcgtcacgatcgatcatttcaagcaagctatttgcaat
tctctgcaggagtataatcaacacattcaagatctgaaggaagaaatgcaagaagcaacg
aaagcagcagagctaatacgaaaagacattcaaactttcagaaccagatgcacctttgtg
catgcgcgggatacgtgtaatacatgtgaggtgcaattgttgctgaggcctttctatgta
tttccctgtggtcataagtttcatagcgattgtttagtagcagcattaacgccgatgtta
tcgatggatcagaggacgaaactggcggatcttcagcgtcagctcacggccgtctcgaac
cggcccgaagacaccacgtccacaacctccgtatcgttatccacaagggaccaaatcaag
gccgatatcgatgatttggtcgccgcggagtgcctctattgtggagaacttatgatagag
tcaatagataagccattcattgaagaaaaggattacgaacgtgtaatgaaggaatggatg
taa
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