KEGG   Monomorium pharaonis (pharaoh ant): 105834725
Entry
105834725         CDS       T05760                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
mpha  Monomorium pharaonis (pharaoh ant)
Pathway
mpha03013  Nucleocytoplasmic transport
mpha03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mpha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105834725
  09122 Translation
   03013 Nucleocytoplasmic transport
    105834725
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpha03019]
    105834725
   03041 Spliceosome [BR:mpha03041]
    105834725
Messenger RNA biogenesis [BR:mpha03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     105834725
Spliceosome [BR:mpha03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105834725
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 WD40_Prp19 WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_ACSF4 Beta-prop_WDR41 ANAPC4_WD40 Beta-prop_EML NBCH_WD40 Beta-prop_SCAP Beta-prop_LRRK2 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_IFT140_2nd Beta-prop_NUP159_NUP214 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_Vps41
Other DBs
NCBI-GeneID: 105834725
NCBI-ProteinID: XP_012532853
LinkDB
Position
11:10695973..10698269
AA seq 331 aa
MIDSTDKKLLYNTVLSQTFSPDGNYLLAGNIYGDVSVFDLSKVLGPNKVEENELHGPSYR
FAAHSDQEVACMLSVENFLVTGTRGEISGWDWKMVTSNKSSKSKVSWNVQIPVNKDSYDK
PDVNCMVYSKVNNLLYIGCGDNNIYIINLEDRKILRRLQGHTDYIHCLAIMDNQLASSSE
DGSVRLWDLRKRENTNILTPHLVDKVARPRFGKWIGAVDFTEDWLLCGGGPSLSLWHMRT
MEVATVFDLADQGIHVAEIYEDRVIAGGTTNYVHHTTYQGEVLAKVPTSSLTVYSVVHQE
TPHKVLSMAGTSNSIDISTNFNYREMTLKFA
NT seq 996 nt   +upstreamnt  +downstreamnt
atgatagactcgaccgacaaaaagttactttacaacactgtgctgtcgcaaactttttca
cccgatggaaattatcttctggctggcaacatttacggagacgtttcagtatttgacctg
tcaaaagtcttaggacccaacaaagtggaggagaatgaattacacggacccagttatcgc
tttgccgcacattctgatcaggaggttgcgtgtatgctctctgtggagaattttcttgtg
acagggacgcgtggcgaaatatcaggatgggactggaagatggttacgtcgaataaatct
tctaaaagcaaggtttcttggaatgtacaaattcctgttaataaagatagttatgataaa
ccagatgtaaactgcatggtgtattcaaaggtgaacaatttactgtacattggttgtggt
gataataacatttatattataaacttggaggacagaaagattctgagacgcttacagggt
cacaccgattacatacactgccttgccataatggacaatcaacttgcatccagcagcgag
gacggttctgtcagattatgggatttgcgcaaaagagagaacactaatatattaacgccc
catttagtagacaaagttgctcgaccacgattcggaaagtggattggcgctgttgatttc
acggaagattggttgctgtgtggtggtggccctagtttatcattgtggcacatgcgaacg
atggaggtagcaacagttttcgatctggctgatcaaggaattcacgtagccgagatctac
gaagatcgagtaatcgctggcggtacgaccaactacgttcatcatacgacataccagggc
gaggttctagctaaagtccccacttcaagcctcactgtctacagcgtggtgcatcaggaa
acgccacacaaggtgctcagcatggccggcacttcaaacagcatcgacatcagtacaaac
ttcaattatcgtgaaatgacactcaagtttgcgtga

DBGET integrated database retrieval system