Monomorium pharaonis (pharaoh ant): 105834725
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Entry
105834725 CDS
T05760
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03013
Nucleocytoplasmic transport
mpha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105834725
09122 Translation
03013 Nucleocytoplasmic transport
105834725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105834725
03041 Spliceosome [BR:
mpha03041
]
105834725
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105834725
Spliceosome [BR:
mpha03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105834725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_Prp19
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_ACSF4
Beta-prop_WDR41
ANAPC4_WD40
Beta-prop_EML
NBCH_WD40
Beta-prop_SCAP
Beta-prop_LRRK2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_IFT140_2nd
Beta-prop_NUP159_NUP214
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
105834725
NCBI-ProteinID:
XP_012532853
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Position
11:10695973..10698269
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AA seq
331 aa
AA seq
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MIDSTDKKLLYNTVLSQTFSPDGNYLLAGNIYGDVSVFDLSKVLGPNKVEENELHGPSYR
FAAHSDQEVACMLSVENFLVTGTRGEISGWDWKMVTSNKSSKSKVSWNVQIPVNKDSYDK
PDVNCMVYSKVNNLLYIGCGDNNIYIINLEDRKILRRLQGHTDYIHCLAIMDNQLASSSE
DGSVRLWDLRKRENTNILTPHLVDKVARPRFGKWIGAVDFTEDWLLCGGGPSLSLWHMRT
MEVATVFDLADQGIHVAEIYEDRVIAGGTTNYVHHTTYQGEVLAKVPTSSLTVYSVVHQE
TPHKVLSMAGTSNSIDISTNFNYREMTLKFA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgatagactcgaccgacaaaaagttactttacaacactgtgctgtcgcaaactttttca
cccgatggaaattatcttctggctggcaacatttacggagacgtttcagtatttgacctg
tcaaaagtcttaggacccaacaaagtggaggagaatgaattacacggacccagttatcgc
tttgccgcacattctgatcaggaggttgcgtgtatgctctctgtggagaattttcttgtg
acagggacgcgtggcgaaatatcaggatgggactggaagatggttacgtcgaataaatct
tctaaaagcaaggtttcttggaatgtacaaattcctgttaataaagatagttatgataaa
ccagatgtaaactgcatggtgtattcaaaggtgaacaatttactgtacattggttgtggt
gataataacatttatattataaacttggaggacagaaagattctgagacgcttacagggt
cacaccgattacatacactgccttgccataatggacaatcaacttgcatccagcagcgag
gacggttctgtcagattatgggatttgcgcaaaagagagaacactaatatattaacgccc
catttagtagacaaagttgctcgaccacgattcggaaagtggattggcgctgttgatttc
acggaagattggttgctgtgtggtggtggccctagtttatcattgtggcacatgcgaacg
atggaggtagcaacagttttcgatctggctgatcaaggaattcacgtagccgagatctac
gaagatcgagtaatcgctggcggtacgaccaactacgttcatcatacgacataccagggc
gaggttctagctaaagtccccacttcaagcctcactgtctacagcgtggtgcatcaggaa
acgccacacaaggtgctcagcatggccggcacttcaaacagcatcgacatcagtacaaac
ttcaattatcgtgaaatgacactcaagtttgcgtga
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