Monomorium pharaonis (pharaoh ant): 105835294
Help
Entry
105835294 CDS
T05760
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105835294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mpha03041
]
105835294
Spliceosome [BR:
mpha03041
]
Complex C
Other components
Step II factors
105835294
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
EIF3I
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML
WD40_RFWD3
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_SCAP
PQQ_2
Beta-prop_NWD2_C
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
105835294
NCBI-ProteinID:
XP_012533877
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MLALKDYGSSDESETENDSTAAPNKKFTSNLPEIVATGTELCTKHPDSTATEVTYNPGEK
FTSSLQICSAPEVVPTGTELCIKHTDPTATEVLYNPKYEELFGPEVGPENPFKTQQQRAV
KNMLSGYVESAHISEFQFENQRRTFASYGYALDPTVDGSADEGRVMIGATEAAEESGGKT
VFENTILRPSDKRKRNRNNNPSDIEGFLGPWGGYVDEKRVIKPSEEEAAELEEILAKRNK
RGKQTEEKPLEEKTVLHIKDSVDYQGRSFLHAPQDVGVNLRSESPPDRCFLPKAQIHTWE
GHTKGISQIRWYPRTAHLLLSCSMDCRVKLWEVYKDRRCVRTYYGHRQAVRDISFDNDGK
RFLSAAYDRYVKLWDTETGACISRFTSRKIPYCAKFNPDPDKQHLFVAGTSDKKIICWDI
RSGEITQEYDRHLGAVNTITFVDENRRFVTTSDDKSLRVWEWDIPVDMKYIADPSMHSMP
AVTPSRNQKWLACQSMDNKIVIFSALNRFKMNRKKTFTGHMVAGYACGLDFSPDMSYLVS
GDADGKCYIWDWKTTKLYKKWKAHDGVCIDVLWHPHEPSRLATAGWDGKIKYWD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgctggcactaaaagattatggtagcagcgatgaaagcgaaaccgaaaacgactccaca
gcagcacctaataagaaattcacgagcaatctcccggagattgtggctactggaacagaa
ttgtgtacaaaacacccagattcgactgcaacagaagttacatataatcctggtgagaaa
ttcacgagcagtctccagatttgctctgctccagaggtcgtgcccactggaacagaattg
tgtataaagcacacagatccaactgcaacagaagttttatataatccaaaatatgaagag
ctttttggacctgaggtaggaccggagaatccattcaagacgcagcagcagcgtgcagtg
aaaaatatgctgtccggatatgtagaaagcgcgcatataagtgaatttcaatttgaaaat
caaagaagaacgtttgccagttatggttatgctctcgatccaactgtggatggcagtgca
gacgaaggcagagttatgattggtgcaacggaagcagcagaagaatcgggtggtaagact
gttttcgagaatactatcctgagaccttcagacaaacgaaagagaaacagaaacaacaat
ccatcagacatagaaggttttttgggtccatggggtggttatgtagatgaaaaacgagtt
atcaagccaagtgaggaggaggctgctgaattggaagagatcttagctaaacgaaataaa
cgaggaaaacagacggaggagaaaccactcgaggaaaaaacagtattacatatcaaagac
agtgtggattatcagggacgttcgttcttgcatgcgcctcaggatgtcggcgtgaacctc
agatcggaatcgccgcccgatcgttgcttcctaccaaaggcgcaaattcacacatgggag
ggccataccaaagggatctcgcaaattcgatggtacccacgtacagcgcatttattattg
tcctgtagtatggactgtcgagtgaagttgtgggaagtatacaaagatagaagatgcgtg
cgtacatactatggacatcgtcaggcagtacgagatatcagttttgacaatgatggcaag
cgatttttatcagcagcttatgatcgctatgtaaaactatgggacacagagacaggggca
tgtattagccgctttacaagtagaaaaattccatattgcgccaaatttaatcccgatcca
gataagcagcatctctttgtggctggtaccagtgacaaaaagatcatttgttgggatata
cgttctggtgaaataacgcaggaatacgatagacacttgggtgctgtaaataccatcaca
tttgtcgacgagaacagacgatttgttacaaccagtgacgataagagtctccgggtttgg
gaatgggacattccagtggacatgaaatatatagccgatccatccatgcattctatgccg
gcggtaacaccgtcgcgaaatcaaaaatggcttgcttgccagagcatggacaataagatt
gtcatattctctgcgttaaatagatttaaaatgaatcgaaagaaaacgttcacaggacac
atggtcgcgggatatgcctgcggtttagacttctcgccagatatgagttatttggtatca
ggagatgctgatggtaaatgttatatatgggactggaaaacaacaaaattgtataaaaaa
tggaaggcccatgacggtgtttgcatcgatgtgttgtggcatccacatgaaccttctaga
ctcgctactgctggctgggatggcaaaatcaagtattgggactaa
DBGET
integrated database retrieval system
