Monomorium pharaonis (pharaoh ant): 105835460
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Entry
105835460 CDS
T05760
Name
(RefSeq) nuclear RNA export factor 1 isoform X1
KO
K14284
nuclear RNA export factor
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03008
Ribosome biogenesis in eukaryotes
mpha03013
Nucleocytoplasmic transport
mpha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105835460
03015 mRNA surveillance pathway
105835460
03008 Ribosome biogenesis in eukaryotes
105835460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105835460
03009 Ribosome biogenesis [BR:
mpha03009
]
105835460
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105835460
mRNA cycle factors
Stress granule specific factors
105835460
Ribosome biogenesis [BR:
mpha03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
105835460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
TAP_C
NTF2
LRR_8
LRR_4
LRR_9
Motif
Other DBs
NCBI-GeneID:
105835460
NCBI-ProteinID:
XP_036149389
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All DBs
Position
11:11436848..11450749
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AA seq
651 aa
AA seq
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MPKKSNKSWGGRGNGRGNEDKGYFGHDDRVGRNVGRDGIHIGPTKHRVSFKTFRPNNRDM
SRNLALVNLDEDIPMTGSSNNNRQVVINQRDRERGDRAWRIVSRGRNSPMPNRHFKGGQQ
GSRMRPLPIGESSWYRIIIPYGHKYEKDYVINTLLNYMAPEVFVPLTYKLMGNEASFYVD
DYKTANALLNCDRKITMSDGFKLQVKAKPGFPVCEIDNKLKERLKQAMVKRYVQETNALD
LSKFHLDPELYSDYFCALFHPIMLITVLDIVGEHIPNLEALNLEGNKLQNIERLSVLSKK
FSKLKILYISDNKIRDIHQLDFIKDLKLVELKLTGNPVCNKYKSRQNDYVSGYFFCYYSD
VRKRFPKLLHLDGIELPRPIVFDVVDDAAKIPPSQRMFVADAKAQDIASQFLQQYFTIFD
SENRQPLLDAYDEHACFSMTITTSHNNKLNGYLLENRNLFRINDNNRRQKLLKQGRLPVV
SFVSELPRTRHLLNTFTMDISLAAQTMMFITITGYFQELDNKSEPIRYFNRTFIIVPEGE
GYCIRNEQLHISQPPEAQLKQLHQQLSQLSNQQTQLTTPALRPIEEVKPMATELSDDIKQ
QMTMTLSQQTNMNLEWSLKCLQETQWNYENALSAFQEFFARGQIPSEAFTK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaaatccaacaagtcgtggggaggacgtggaaacggccgaggaaatgaagac
aaaggttacttcggtcatgacgatcgtgtaggaagaaatgtagggagagatgggattcat
attggccctacaaagcatcgggtttctttcaagacttttcggcctaacaacagggacatg
tcacgcaacttagcattggtaaatttggatgaggatattccaatgactggaagttccaac
aacaataggcaggtagtgattaaccagagagatagagaaaggggtgacagggcttggcga
attgtgtctcgtggaagaaacagtcccatgccaaatagacatttcaagggaggccagcaa
ggttctagaatgcgacctcttcccattggcgaatcaagttggtatagaattattatacca
tatggtcataagtatgaaaaggattatgtaataaatactcttttgaattatatggcgcct
gaagtatttgttcccttaacatacaagttaatgggaaatgaagctagtttctatgtggat
gattataagacggcaaatgcattgctaaactgcgatcgtaaaattacgatgagtgatgga
tttaagttacaagtgaaggcaaaaccaggatttccagtctgtgaaattgataataaattg
aaagagcgattgaagcaagcgatggtgaagagatatgtacaagagacgaatgctttagat
ttgtccaagtttcaccttgatcctgaactttattctgattatttttgtgcattgttccac
cctattatgttaataactgtgttggatattgtgggggaacacataccaaacttagaagct
ctcaacctggagggcaataagttgcagaatatcgagagacttagtgtactaagtaaaaag
ttctcgaaattgaagattctttatatcagcgataataagattagagacattcatcagcta
gacttcattaaggatttaaaattagtcgaattgaagttaactggaaatcctgtctgtaat
aaatataaatctcgacaaaatgactatgttagcggatatttcttttgctattatagcgac
gtccgaaaaaggttccctaagctgctgcatctggatggcatcgaattaccacgaccgatt
gtcttcgatgttgttgacgacgctgccaagattcccccgtcgcagagaatgtttgtcgct
gatgcaaaagcacaagacattgcaagtcaatttttgcagcaatatttcactatatttgac
agtgaaaatagacaacccttacttgatgcgtatgacgaacatgcatgctttagcatgaca
ataaccacttctcacaataacaaattaaatgggtatctcctggagaatcggaatctattc
agaataaatgacaacaatagaagacagaaattattaaaacagggtagattacctgtagtt
tcttttgtatcagaattaccacgaacgaggcacttattgaacacctttacaatggacatc
tctcttgctgcacaaacgatgatgtttattacgataacgggctacttccaagaactcgat
aataaaagcgagcctatccgctactttaaccggacatttataattgttccggaaggtgaa
ggatactgtattcgaaatgaacagttacatatcagtcagccgcctgaggcgcaattgaag
caactgcaccagcaattgagtcagctaagcaatcagcaaactcagctaacaacaccagcg
cttagacccatagaagaggtaaaaccgatggcaacggagctcagcgacgatataaaacag
cagatgacgatgacattgagccagcaaacaaatatgaatctggaatggagtttgaagtgc
ttgcaagagacgcagtggaattatgaaaacgccctctctgcctttcaagaattttttgcg
cgtggacagataccatcagaagcgtttacgaagtaa
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