Monomorium pharaonis (pharaoh ant): 105835474
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Entry
105835474 CDS
T05760
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03013
Nucleocytoplasmic transport
mpha03015
mRNA surveillance pathway
mpha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105835474
09122 Translation
03013 Nucleocytoplasmic transport
105835474
03015 mRNA surveillance pathway
105835474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105835474
03041 Spliceosome [BR:
mpha03041
]
105835474
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105835474
Spliceosome [BR:
mpha03041
]
Complex C
Other components
EJC/TREX
105835474
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
RRM_1
Motif
Other DBs
NCBI-GeneID:
105835474
NCBI-ProteinID:
XP_012534243
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Position
3:9224326..9229668
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AA seq
863 aa
AA seq
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MRRKSERNKAKGSPEKKVEKPTRKSTRRRGRRSPSTSSEQDAFVEDAAKSTVQLKEIEET
NMQTRLQSKELEHTSQGHEEKVSSSDINIKVDSPEDEDNGGSVWKVARADASPGEIQKLK
LCRQRNTSEPSSDTPPSSRKSVRSTGKWQGSGEGVAEEADSADEQLVSCTRMLSSAEQPN
DPSSSYPGQDSNEEVSDSKEILPETTSANLLSDDKPNIDQHGESNEANCAAQIVDIEPGK
PGSPGSPTTALVPSTNGEETETTAVVKEDKPVEDTSEKSTEIFVKETSVENVRKDTSSED
EEAEEEQEEVNDKAKTLPPVDSSSDSNDESRLKRSRTSSDQTSPRAMRRKHRNKYRDSSN
SETPDSEDEPVDRKVSEPYVEEEEEEEKPSTEYSQENNKEQSVSPERTNSQSNNVEKTDI
EHSETIEDKSEENATEKLEQSTPASTQVVAHKPVKVNLKRSFSTRISEKNEVKRDDADAT
IDNESSQNKENGSEQEPKCVPRKRRWGTALSTDTAPSFSISTDSLKALVPGAKPLSINEV
RLSKDDDEDRDRHRSNDKWHNSSDIINDRAADENLQKNGTAKKGTGKIDNHIATRRKISI
VKEMPHMKSPSPPASKPTNILLIKNLVRPFTLNQIKELLSRTGTIVENGFWMDRIKSKCI
VEYSNEDQAFETRQALHGISWPLSNPKKLHVEYATKEDMETARESSKEQPITRKTEPLSS
DSWQQDWSRDEKSNTTKVTVVREWDLGKEDGQQHVREKEREKKEYDKKRRVRSRSPTLDA
HLSAPARKFKKKEDDPPPAKLLDDLFRKTKATPCIYWLPLTNEQIVVKEEMRRQHMAEHA
RRLEEMRRADRNRDGRRRRSPRK
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcaagagtgaaaggaacaaagcaaagggatctccagagaagaaagtcgaaaaa
ccgacgaggaagtcaacgcgtaggcgtggcagaagatcgccttccacttcgtccgagcag
gatgcttttgtcgaagatgcggctaaaagtactgttcagttaaaggaaattgaggagacg
aatatgcagacacgcctgcagagcaaagaattagagcatacatcgcaagggcacgaggag
aaggtttcctcgagtgatataaacataaaggtggattcgcccgaagatgaggacaacggc
ggctcagtgtggaaagtagcgagagcggatgcgtcacctggtgaaatacagaagctgaaa
ttgtgcaggcagcgcaacacgtcagaaccatcatcagacacaccaccatcgagcaggaag
agtgtcaggtcaactggcaagtggcaaggaagtggtgagggcgttgcagaggaggctgac
tcggcagatgagcaactggtttcttgtacaagaatgctcagtagcgctgaacagccgaac
gatccctcctcttcatacccaggtcaggactccaacgaagaggtaagtgatagcaaggag
atcctgcctgaaaccacttcagccaacttgttgtctgacgataaaccaaacatagatcag
catggtgaatcaaatgaggcaaattgcgctgcccaaatagttgatatcgaacctggtaag
ccgggtagcccgggtagtccgacaaccgcgctggttcctagcacgaacggtgaggagacg
gagaccactgccgtcgttaaggaagataagcctgtggaagacaccagtgaaaagtcaacg
gagatatttgtcaaagagactagcgtggaaaatgttcgtaaagatacgagtagcgaggac
gaggaggcggaggaggagcaggaggaggtgaacgataaggcaaaaacgcttcctccagtg
gactcgtcgtccgattcgaatgatgaatcgcgccttaaaagaagcaggacaagcagtgac
caaacgtcaccacgcgcgatgcgcagaaaacatcgaaataaatacagagactcatctaat
tcagaaacacctgattctgaggatgaacctgttgatagaaaggtctctgagccttatgtg
gaggaggaggaagaagaagaaaaaccgagtacagaatattcgcaagagaataataaagaa
caatcagtatcgccagaaagaacaaattctcagtcgaataatgtagaaaagacggacatt
gaacacagtgaaactattgaggataaatcggaagaaaatgcaactgagaaattggaacaa
tctacaccagctagcactcaggtggtcgctcataaacctgttaaagtcaacttgaagaga
tcattctcaacaaggatatccgaaaagaacgaagtaaaaagagatgatgctgatgcaacc
atcgacaatgagtccagtcaaaataaggaaaatggcagcgaacaagaaccaaaatgtgtg
ccgagaaaacgtcgatgggggactgcactttccacggatactgcgccttcgttttctatc
tcgaccgattcacttaaggcattggtgccgggtgcgaagccattatccattaacgaagtt
cgtctctcaaaggatgatgacgaggatagagatcgacatagaagtaacgataaatggcac
aattctagcgacattattaatgatagggcagcggatgaaaacttgcagaaaaatggcact
gccaaaaaaggcactggaaaaatagataatcacattgcaacaagacgaaagatatcaatt
gtgaaggaaatgccacacatgaaatcaccaagtccgccagcatctaaacctaccaatatc
ctcttgatcaagaatctagttcgtcctttcacattaaaccagataaaggaacttctgtca
cgcactggcaccatcgtggaaaacgggttctggatggatcgaataaagtctaaatgcatt
gtcgaatattctaatgaggatcaggcctttgagacaagacaggcgcttcacggaatctct
tggcctctgtcgaatccaaagaagcttcatgtggaatatgctacgaaggaggatatggag
actgctcgagaatcatccaaggaacaaccgattactcgtaaaaccgagccactctcgtcg
gattcgtggcagcaagattggagtcgtgacgaaaaatctaatacgactaaggtgaccgtg
gtaagagaatgggatttaggaaaagaggatggccagcaacacgtcagggagaaggagcgt
gaaaagaaagagtacgataaaaagcgacgagtgaggagtcgtagcccaacattggatgcg
catttatcggcaccggctcgcaaatttaagaaaaaggaagacgacccaccgccagccaaa
cttttggatgatctttttagaaagactaaggcgacaccctgtatatactggttgccgctt
acgaatgaacagatagtagtgaaggaggagatgcgacgacaacatatggcagaacatgcg
cgcagattagaagagatgagacgcgctgatagaaacagggatggtcgacgtcgacgtagt
ccaagaaaatag
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