Monomorium pharaonis (pharaoh ant): 105835627
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Entry
105835627 CDS
T05760
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105835627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mpha03041
]
105835627
Spliceosome [BR:
mpha03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
105835627
Complex C
U5 SnRNP specific factors
105835627
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_TEP1_C
ANAPC4_WD40
NBCH_WD40
Beta-prop_SPT8
eIF2A
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Ge1_WD40
Beta-prop_WDR35_TULP_N
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
105835627
NCBI-ProteinID:
XP_012534535
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Position
9:15217886..15220191
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AA seq
349 aa
AA seq
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MPILDKRKSDDILALVPASKRTKNEVVFSNREKAVIQSGPPRTSSLMSMIMLLEGHQGDI
FSIEFHPEGQYLASTGFDRQIFIWNVYGECENIGVMTGHSGAIMELHFSPDGNHLYTAST
DMTLGLWDIIAGTRIKKLKGHTSFVNSVSGARRGPTLLCSGSDDSTIRIWDPRKRGQCYT
LNNTYQVTAVTFNDTAEQVISGGIDNDIKVWDLRKNAVLYKLKGHTDTITGLSLSPDGSY
ILSNAMDNMLKIWDVRPFAPYERCVKILSGHQHNFEKNLLRCAWSLDGSKVSAGSSDRFH
YIWDTTSRRILYKLPGHNGSVNDIDFHPKEPIVCSGSSDKQIYLGEIEA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcttggacaaaagaaaaagcgacgatatcttagcgttggtgcccgcttcgaaa
agaaccaagaatgaagtcgtctttagcaacagggaaaaagcggttattcaaagcggtcca
ccacggacgtcctccttaatgtcaatgataatgctactcgagggacaccaaggggatatc
ttctccatagaatttcatcctgaaggacagtacctcgcgtctacaggatttgatcgacaa
atatttatctggaatgtttatggagaatgtgaaaacattggtgtcatgactgggcacagt
ggtgctataatggaattacattttagtccagatggcaatcacttgtatacagctagcaca
gacatgacattgggcttgtgggatataatagctggcacacgaattaaaaagctaaagggt
catacttcgtttgtaaattctgtatcaggtgcgcgaagaggacccacactgctctgttcg
ggtagcgatgacagtacgatacgtatttgggatcccagaaaacggggtcagtgctatacg
ttaaacaacacatatcaggtcactgcagtgacgtttaatgatacagcggaacaagtgatt
agcggaggtattgataacgacataaaggtatgggatcttcgaaagaatgctgtactttac
aagttgaaaggccacactgataccatcactggattaagtcttagtcctgatggatcttac
atactttccaatgccatggataacatgctgaagatatgggacgtaagaccatttgcgccc
tatgagcgttgtgtgaagatattatcgggacatcaacacaatttcgaaaagaatctactc
agatgtgcgtggtcactggatggtagcaaggtatcagcaggatcgtcagaccgatttcat
tatatctgggatacaacgagtcgtagaatattatacaagttgccagggcacaatggatct
gtgaacgacatcgatttccatccaaaggaacctatagtgtgctcaggatctagcgacaaa
caaatttatctgggtgaaattgaagcttaa
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