Monomorium pharaonis (pharaoh ant): 105836004
Help
Entry
105836004 CDS
T05760
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03008
Ribosome biogenesis in eukaryotes
mpha03013
Nucleocytoplasmic transport
mpha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105836004
03015 mRNA surveillance pathway
105836004
03008 Ribosome biogenesis in eukaryotes
105836004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105836004
03009 Ribosome biogenesis [BR:
mpha03009
]
105836004
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105836004
mRNA cycle factors
Stress granule specific factors
105836004
Ribosome biogenesis [BR:
mpha03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
105836004
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_NXF1-2
NXF_NTF2
TAP_C
LRR_NXF1-5
NTF2
LRR_NXF2
LRR_4
LRR_6
LRR_8
UBA_8
UBA_4
Motif
Other DBs
NCBI-GeneID:
105836004
NCBI-ProteinID:
XP_012535198
LinkDB
All DBs
Position
10:18861313..18864259
Genome browser
AA seq
544 aa
AA seq
DB search
MASPTKSEAKLTATIDQTSWEPYRITYMKPAFDSLEMTLACRKDIWHKFIVFNGGLYMRT
DVLRAFVNACEPALLIPIMYTVENNNKTTFLAKCASNAIENLVKQGLCVTLPGGQELYMD
IVLGYLSGQELQVNTNKIIAEALHTRYEPIRKVFNLDNFENEKALGSIFCPISIPKIFDL
VLRCSKVGIMSNNREAVGGRLPVRELSLRYNKLTAIILFDKFFSYHLTKLDLRHNQILDV
EYLRYFSEFKISELWLDGNPLCTRYINSQDYIQAVKNVFPHLQKLDGVVIGMEQKFVPNV
QNYYLGNGSRIPLIRQFVKHFFTLYDQEDRIVMHGLYDKNAFYSMTLGSITNHAHKEIMK
TFSTNRNLLKFADYAKCHEFLFCGPEKIIAALQRQPPTMHDLKTIQIDLLHEDDNHLVIS
VQGLFAFRPMIYPPMLYNRTFVIVRKEDNEYAIVNDQYYIDGTPANAGNEMKFDPRPVPK
FTPMVLSVSEKEQLLRFLRELTTMNIRYCYKYLEDAEWDIRTAITTFMKHYSVNDVPPKA
FEST
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaccaacaaagtctgaggcgaagctgacggcaacgatagatcagacttcatgg
gagccgtaccggattacatacatgaaaccagctttcgacagcctcgagatgactctcgca
tgtcgcaaggacatctggcacaagtttatcgtcttcaacggcggcctatatatgcgcacc
gatgtcctacgtgccttcgtaaacgcttgtgaaccggcacttctaataccgatcatgtac
accgtcgaaaacaacaataagactacgttccttgccaagtgcgccagcaacgctatcgaa
aaccttgtgaagcaggggctatgcgtgacgttgccgggtggccaagaactgtatatggac
atcgttctcggttatctcagcggacaggagctgcaggtgaacacaaacaagatcatcgca
gaagctttgcacacccgatacgagccgataagaaaggtgttcaatctggacaacttcgag
aatgaaaaggcgcttggctcgatattctgcccaatctccataccaaagatcttcgatctg
gtgctgcgctgcagcaaggtgggcatcatgagtaacaaccgcgaggccgttggtgggcgg
ctgccagtccgcgagctcagcctgcgatacaataagctcacggcgattatcctatttgac
aaattcttcagttaccacttgaccaagctggatctgcgccacaatcagatcttggacgtg
gagtatctgcgttacttctccgagttcaagataagcgaactctggctagatggaaatcca
ctgtgcaccaggtatatcaactctcaggactacatacaggcagtgaagaacgttttcccg
catttgcaaaaactcgacggagtcgtcataggaatggagcaaaagttcgtaccgaatgta
caaaactattatcttggcaacggatcgaggatacctctgatcaggcagtttgtcaaacac
ttcttcacactgtacgatcaagaggatagaatagttatgcacggcctatacgacaagaac
gcattctactccatgacgctaggcagtataacgaatcacgcacacaaagagattatgaag
acgttttccacgaacagaaatctgttgaaattcgccgactacgccaagtgtcatgagttc
ctattctgtggacctgagaaaataatcgccgcgctgcagcggcaaccaccgacgatgcat
gatctcaagacgattcaaatcgacctgttgcacgaagacgataatcacctggtcatctct
gtacaaggactgttcgcatttcgaccaatgatctatccgcctatgttgtacaatagaacc
ttcgttatcgtgcgaaaggaggacaacgagtatgccatcgttaacgatcagtattacatc
gatggtacgcccgccaatgcgggtaatgagatgaaatttgatccgagacccgtgcccaaa
tttactccaatggtactcagcgtgtcagagaaggagcaactgcttagatttttacgtgaa
cttacaacgatgaatattcgatattgttataaatatcttgaagatgcggaatgggatata
agaaccgcgatcactacatttatgaaacattattcggtcaatgacgtccctcccaaagct
tttgagtcaacatag
DBGET
integrated database retrieval system
