Monomorium pharaonis (pharaoh ant): 105836028
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Entry
105836028 CDS
T05760
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mpha04147
]
105836028
00535 Proteoglycans [BR:
mpha00535
]
105836028
00536 Glycosaminoglycan binding proteins [BR:
mpha00536
]
105836028
Exosome [BR:
mpha04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105836028
Proteoglycans [BR:
mpha00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
105836028
Glycosaminoglycan binding proteins [BR:
mpha00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105836028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
DUF1554
IBIN
Motif
Other DBs
NCBI-GeneID:
105836028
NCBI-ProteinID:
XP_012535235
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All DBs
Position
6:20241278..20485183
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AA seq
1138 aa
AA seq
DB search
MSLRSLLVILAFALCATCNRADFFGGKEVAYDLMVASVSSMMDDNNLYMDDGVDGFPAFG
FRPGSEVKQPYRLYLPEKLPAEFTLVATFKPTSFRTSYLFAVLNPFETVVQLGIRISDGP
GSNQNISLVYTNSDEHSHSEEVAKFTVPKLTKKWSKIVIKVSTNDVTLYLNCHEMARQRI
TRIPQELVFDTASTLYIAQAGPHIQERYDGLLQSLKLYAGHPPDLVKCTADFDISRDVDE
DKSEESNPPPFITPPPPNLDYKGPKGEKGDKGEKGESVRGPPGPPGPPGRDEDWLMKIPQ
GPPGQKGDPGTCTCNATALMSSFTMPKMIQGPKGEPGVPGQEGKQGLMGLTGAAGPPGER
GLQGPSGAKGDKGDIGIAGPEGPQGQKGEPGRDGIPGEKGAQGPPGPPGKGEFSGYDPSW
KPRNIYRPEGITMRPGLPGQKGEPGISGSPGPKGESGIPGSKGIKGEPGHKGAKGDHGKD
GPRGIQGFKGEPGAPGAPGLPGAPGENGRPAEKGDKGDTGPEGKVGSPGPPGPPGMGGSG
GINVGDLGFGTKGDKGDGGERGYKGDKGTKGEKGDKGDSGPAGIPGINGIQGPQGDKGEP
GKDGVSGLPGIPGAKGERGERGPPGATTVANSGDYITIKGEKGAEGKRGRRGRPGPPGPV
GPPGKPGTMGEIGLPGWMNTIKGRPGTPGIPGSIGPMGPKGDKGEPGAPSPYGVSVGIKG
DKGDDGFPGIPGQSGRDGQRGPPGPPGPPGAPSQGKYIPVPGPPGPPGPPGPPGLSLIGQ
KGEPGIGRSHVFGERDYYPPRQGARSSLDELKALRELKQLKELKEQLGVVTAATRGPLES
TTKIVPGAVTFQNTEAMTKMSSVSPVGTLAYIIDEQALLVRVNNGWQYIALGSLLPITTP
APPTTSPPPANPPFEASNLINQIPVKADGTGWYPRMLRMAALNEPFTGDMHGIRGADYAC
YRQARRAGLRGTFRAFLSSRVQNVDSIVRLGDRDLPIVNIKGDVLFNSWKEMFNGNGAYF
SQNPRIYSFNGKNILTDFAWPEKVAWHGSHKLGDRAMDTYCDAWHSSSSDRYGLGSPLTG
GRLLEQVRYSCDNKFALLCIEVTSELVRRRRNADDRPDDDIEMSENDYMEYLEELMQY
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttaggtcgttactggtgatcctcgcctttgcgctatgcgcgacgtgcaaccgc
gctgacttcttcggcgggaaggaagtggcgtacgatttgatggtcgcgtcggtgtcatcg
atgatggacgacaataacctttacatggacgatggcgtggacggatttcccgcatttggc
tttcgacccggctccgaagtgaagcaaccctacagactgtatcttccggagaagttgcca
gccgagttcaccctggtagccacgttcaagccgacctcctttaggacgagctacctcttc
gccgttctcaatcccttcgaaaccgttgtccaattgggcattagaatttcggatgggccc
ggctcgaaccagaatatctccctggtctatacgaattcggacgagcattcgcattcggag
gaggtggcgaagttcaccgtgccgaagcttacgaagaaatggtcaaagatcgtcattaag
gtttcgacgaacgacgtcaccctctatcttaattgccacgagatggccagacagaggatt
accaggatcccccaggaattagtattcgataccgccagcactctgtacatcgcccaagcc
ggaccgcacatccaggaacgatacgacggtctactacaatctttgaagttgtacgccggc
caccctccggaccttgtaaaatgcactgctgattttgacatcagtcgagatgtggacgaa
gacaaaagcgaggagagcaacccaccaccattcatcacgcccccgcctccgaatctagat
tataaaggtccgaaaggcgagaagggtgacaaaggggaaaagggcgagagtgtcaggggt
cccccggggcctcctggcccacctggtcgcgacgaggattggttaatgaagataccacag
ggaccacctggtcagaagggagaccccggcacttgcacctgcaacgccacggccttaatg
tcttcctttacgatgccaaagatgatacaaggcccgaagggtgaaccaggagtacccgga
caggaaggcaagcagggcctaatgggcctcacgggtgcggcaggaccgccaggggaaaga
ggactgcagggtccgtccggggctaaaggtgacaagggtgatattggaatagcgggaccg
gaaggtcctcaaggtcagaagggcgagccgggtcgggatggaatacccggtgaaaaaggt
gcacagggtccgccggggccacccggaaaaggagaattttctggctatgaccccagttgg
aaacctcgaaatatttacagaccggaaggtatcacaatgagaccaggacttccaggacaa
aagggtgagccaggtatttccgggagccccggtcctaaaggcgaatccggaattcctgga
tctaaaggtatcaaaggtgaacctgggcacaaaggtgctaagggcgatcatgggaaagat
ggacctagaggaattcagggttttaagggtgaacctggcgcgcctggtgcacccggatta
cctggcgcacccggagaaaatgggcgaccggcggagaagggcgataagggtgatacagga
cctgaaggaaaagtaggctctccaggaccgcctggtccacctggtatgggtggttccggt
ggcataaacgtgggagatttaggatttggcacaaaaggagacaaaggcgatggcggagag
cgcgggtacaagggcgataagggcacgaagggcgagaagggcgataagggtgactccggg
ccagctggtattcccggaataaacggaattcaaggacctcaaggagataaaggcgaaccg
ggtaaagacggagtatcaggattacccggcatacctggcgctaaaggcgagagaggtgag
agaggtcctcctggagccactaccgtcgccaattccggagactatatcaccatcaaaggt
gagaaaggcgccgaaggaaaacggggcaggagaggacgacctggaccgcctggtcctgtg
ggtcctcccggaaagccaggaactatgggagagatcggtctaccaggatggatgaacacg
ataaagggtcgccctgggactcctggaattccgggaagtatcggtccaatgggacccaag
ggagataagggggaacctggcgcaccgagtccttacggtgtttctgtcggtatcaaaggt
gataagggagacgatggttttcctggaattcctgggcagtcaggaagagacggtcaaaga
ggacctccaggacctcccggacctcctggagcaccgtctcaaggaaaatatattccagtt
ccaggacctccgggtcctcccggacctcctggtccgcctggcttgtctttaatcggacag
aaaggcgaacccgggatcggtagaagccacgttttcggagaaagagattactatcccccc
agacaaggagccagaagtagtctggatgaattgaaagctctacgtgaactcaagcaactg
aaagaactgaaagaacaattaggtgttgttactgccgctacaaggggacctttagagagt
acaacgaaaatcgtgccaggagccgttacgttccaaaacacagaagctatgacaaaaatg
tctagcgttagtccagtcgggaccctggcttacatcatagatgaacaagctttactagtc
agagttaacaatgggtggcaatatattgctcttggatcacttttgcctattaccacgcca
gcaccaccgacgacatcaccaccgccagcaaacccacctttcgaagcatccaacttaatt
aatcagatacccgtgaaagccgatggaacagggtggtatccgcgaatgttgagaatggct
gcattgaacgaaccgttcactggagatatgcatggtatacgaggagcagattacgcttgc
tatcgacaagcaaggcgagcaggcttgagaggtaccttccgtgctttccttagctctcga
gttcaaaatgttgatagcattgtcagattaggagatcgagatcttcccatagttaacata
aagggtgacgtgctatttaactcttggaaagagatgtttaacggaaatggagcgtacttc
tctcaaaatcccagaatctacagcttcaatggaaaaaacatccttactgacttcgcgtgg
cctgagaaagtcgcgtggcacggttctcacaaacttggcgatcgagcgatggacacctac
tgcgacgcctggcactcgagtagctcggatcgttatggattaggctcgccgttgaccggc
ggccgattgttagaacaagtacgatactcgtgcgacaataaattcgcgctgctctgcatc
gaggtgacaagcgagctggtgaggagacggcggaatgccgacgatcggcctgacgacgat
atcgagatgtcggagaacgactatatggagtacttggaggagctcatgcaatactga
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