Monomorium pharaonis (pharaoh ant): 105836160
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Entry
105836160 CDS
T05760
Name
(RefSeq) exosome component 10 isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105836160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105836160
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
105836160
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
105836160
NCBI-ProteinID:
XP_012535451
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All DBs
Position
9:complement(22061337..22065285)
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AA seq
902 aa
AA seq
DB search
MEFAEEWGNEASVSQNDDLETEKKDEPPSLSPLSAHLIPGYETFDDYLQDAFDAMRAGIK
AANNLPAGDNFNYYTCFPSFNDARRKDMERMLATMQSIIKIAGGSSNIQTRDCDEKFDLL
LEANDQLLDQANILMDEESGILRNPQVELVVSQVPKPVVNGTWNIRTNHSNQVSEKDQSS
EKVRLLGGKNVQRPQLMFKDKIDNSSKPWIPRIKEKPNSLKPLALYVEEGEHNEVFNHPY
EFELNKFQVPKCQLKKKSTSVKYKSLDDTKFIFIDKPADIRILLEDLGNCKEIAIDLEHH
SYRTFQGITCLMQISTTTTDYLIDTLTLRSELHQLNEIFTKPSILKVFHGADMDILWLQR
DLSLYVVNMFDTHQAAKQLNLPYLSLAYLLNKYCGIDPNKHFQLADWRIRPLPSELMRYA
REDTHYLLYIKDMLNNELIEAANGKSNILKAVYDQSTEICKRTYVKPIWTEESCINMYRK
SQKSFNNKQMYALLELHKWRDLVAREEDDSIGYVLPNHMLLNIAETLPREMQGILACCNP
IPPLVRQNLLKIHKMVLKAREQPLVKSIPDQDIRQRLTQPNHTMVDTGVSFLYIPHDIPS
GTEARADLPCLLDKDHKEIVSRPLEANECQMVKHTVTIFDTPVISEDEEMKGNKREEKKE
IIFVSPFMRYKCVIPMVVDEEAKQREQRQKKEHDKEKEEEDLTVKIEDKYINETEINESK
NRVHQHFIQVSQTNNQVQISSKKKKKKFKQVILSQIQGGKRKRDFNNRNKNQKNNDGNDF
SMTTSTSCLDVGTVHMSKKTKQQAQEAIEERKVQESLAQTQGNKCETVKSIRARKKGDKK
VNEKLLKRQGMLPSEKFNYKSVDFSSFQGGSTQSNANQTQFQQPQHKKKKMHQKWKKQKL
NI
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgccgaagaatggggtaatgaggcgagcgtctcgcaaaatgacgacctcgaa
accgaaaagaaggatgaaccgccatcgctatcgccactatcggcccaccttattcctgga
tatgaaacttttgacgattatctccaggatgcgtttgatgcgatgagagctggaatcaaa
gcagctaataatttgcctgctggggacaattttaattattacacttgctttccaagcttt
aacgacgccagacgcaaagatatggagagaatgctggctacaatgcagagcataataaaa
atagcaggaggttctagcaacattcaaactcgagattgtgatgaaaaatttgatctttta
ttggaagcaaatgaccaactgttagatcaagctaacatattgatggacgaggaaagtggt
attctacgaaatcctcaggtagaattggttgtatcgcaagtgccaaaaccagttgtgaat
ggcacttggaatataaggactaatcattccaaccaagtttcggagaaggaccaaagttca
gagaaagtacgtttgttgggtggaaaaaatgtacaaaggccacagttgatgtttaaggat
aaaattgataatagttcaaagccatggatacctcgaattaaggagaaaccaaactctcta
aaaccattagctctatatgttgaggaaggtgaacataacgaggtcttcaatcacccatat
gagtttgaactaaacaagtttcaagtgcctaaatgtcaactgaaaaagaagagcacatct
gtaaagtacaaatcattggacgacactaaattcatatttattgacaaaccagctgatatc
aggattctcctggaggacctgggaaattgcaaagaaatagctatcgacttggaacatcat
tcttacagaacgtttcaaggcataacttgcttaatgcaaatatcaacgacaacaaccgat
tatttaattgacactttgactctgcgatccgaattacatcaactcaatgaaatttttaca
aaaccttcgattctcaaggtcttccatggtgcagacatggatattttgtggctacaaaga
gatttgtctctgtacgtagtcaacatgtttgacacgcatcaagccgcgaaacagcttaac
ctaccctacctcagtttggcttatttgttaaacaaatattgcggtatagatcccaataaa
cattttcaattggccgactggcgtataagacctttaccgtcagaactgatgagatacgcg
agagaagatacgcattatttactttacataaaggacatgctgaacaacgagttaattgag
gcggctaatggcaagagcaatattttgaaggctgtgtatgatcaaagcaccgagatttgt
aagcgtacgtacgtgaaaccaatttggacggaggaaagttgtatcaacatgtaccgaaag
agtcagaagtcatttaacaacaaacagatgtatgcgctcttggaattgcacaaatggcga
gatctcgtcgcgagggaggaggacgacagcatcggctatgttttgccgaatcacatgctg
cttaacatagccgagactctgccacgcgagatgcagggtattctcgcgtgttgcaatcct
attccaccgttagtgcgacaaaatctgttgaaaatacacaagatggtgttaaaggctagg
gagcagccacttgtaaaatctattcctgaccaagatattcggcagagactgacgcaacca
aatcacacgatggtggatactggggtttccttcctgtatataccgcatgatattccgagc
ggtacagaagcgagagcggacttgccatgtcttttggataaggatcataaggagatcgtg
tctagaccgttagaggccaacgagtgccaaatggtcaagcacactgtaacgatatttgac
acaccagttatatcagaggatgaagaaatgaaaggcaataagagagaggagaaaaaagag
attatatttgtaagtccgtttatgagatacaaatgcgttatcccaatggtagtggacgag
gaagcaaaacaacgagagcaacggcaaaagaaagagcatgataaagagaaagaagaagag
gatttgactgtaaaaatcgaggataaatacataaacgagactgagattaacgaaagtaaa
aacagagttcatcaacactttattcaagtgtctcagacaaataatcaagtgcagatttca
tccaaaaagaaaaagaagaaatttaagcaggtaattctaagtcaaatacagggtggaaaa
agaaaaagagactttaataatagaaataaaaatcagaaaaacaacgatggtaacgacttt
tcaatgacgacgtcaacatcatgtttggatgttggaactgtgcatatgtctaaaaaaaca
aaacagcaagcacaggaagcgatcgaagagcggaaagtgcaagagagtctcgcgcaaact
cagggcaacaaatgtgaaacagttaaatcgattagagctaggaaaaaaggtgataaaaaa
gtgaatgagaaactgttaaaaaggcagggtatgttaccatcggaaaaatttaattataaa
tcggtagactttagcagctttcaaggtggtagtactcaaagtaacgcgaatcaaacacag
tttcagcaacctcaacacaagaagaaaaagatgcatcagaagtggaagaagcagaaactt
aatatatga
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