Monomorium pharaonis (pharaoh ant): 105836393
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Entry
105836393 CDS
T05760
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03030
DNA replication
mpha03410
Base excision repair
mpha03420
Nucleotide excision repair
mpha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105836393
03410 Base excision repair
105836393
03420 Nucleotide excision repair
105836393
03430 Mismatch repair
105836393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpha03032
]
105836393
03400 DNA repair and recombination proteins [BR:
mpha03400
]
105836393
DNA replication proteins [BR:
mpha03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105836393
DNA repair and recombination proteins [BR:
mpha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105836393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
AAA
BRCT
AAA_30
Rad17
RuvB_N
AAA_22
AAA_5
BRCT_2
AAA_16
AAA_14
AAA_6
RNA_helicase
AAA_17
NTPase_1
AAA_33
AAA_assoc_2
AAA_19
AAA_18
AAA_7
PTCB-BRCT
Viral_helicase1
TsaE
Motif
Other DBs
NCBI-GeneID:
105836393
NCBI-ProteinID:
XP_012535848
LinkDB
All DBs
Position
8:complement(7794409..7806195)
Genome browser
AA seq
1016 aa
AA seq
DB search
MPRDIRSYFAPIATSKKNSEPVAIKPQKRRVISSDEDEEAPKSSPKRSKVVRKTKKSSIL
SDSEDEAFVKDDKKNSRQSKASKNESEKPREAMLPGELFGKKPIMRVEETKVNQKLQKME
SEFHDDEDFDAVLKQLDAFQDTKQKNKKKDNIKKISKKSEVKTEVDINKKHDTYLKDSNN
GINISTLKTEEVRKSPSKHNACSKIVTSSSKKLQKAIKSSTNGDLDISDEYNESSKQLNF
DNSTSTSASEEDKNTERSSRKKAKTMDLFEERIEKKKQRAIMYEKYLQRGGARNPGSKEI
PTGATNCLTGLSFLITGVLDSLERDEAEDLIRKYGGRTVNSVSSKVNYIIVGDEAGPAKL
AKANSIGIKQICEDDFLEMIRTRPEGRAEDIKPVIKKSNIKKSLNKSESDKLLLLNETSF
STKKVKTPSSSPVKTEILPSVSKEASDMSNNIQKMITSVGSEPLVEKYRPKTMKQIIGQQ
GDKSCAHNLYIWLRDWHKNRQDPKVKNGTAKQTHGQSFKAALLSGPPGVGKTTTVQVVCK
ELGYDLVEFNASDTRNKTLLKEAVSGLLSNTTMKDYVTGTKQKITSKHVLLMDEVDGMAG
NEDRGGLQELVGLIKSTEVPIICICNDRFNTKVKTISTHSYDLKYSKLRVEQIRSSMKSL
CFKENIKISTEDLDRLIESTNYDIRQVINHLEFLGSQTSHTEKTDKKYSNKNFKLGPFDV
TKMAFNAEEQKNMSLNDKIALYFHDYNITPLFIQENYPSVRVLQASLHQRLEKIADAADS
ISQGDLIEKVMRSNMMWSLLPMHACFSFVIPTSKMSGCSEPLIRFPSWFGRNSKATRFNR
LMQELTTHTRLATGANKDALNMDYLPHIRNAIVKPLIDNGVDGIEAAINIMGKYYLTRED
LDSAIEISLWPGICDPTSNLDSKVKAAFTRAYQKNPPILPYAFNTTATAKKRSMQNNDFM
TEEDDEEETDDIDFDKMIKAKKPNTSKAAASSSKTASTKKGSEPAKKRGKGRGKIK
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgccacgggatatcagatcctattttgcgccgattgcgacttcaaagaagaacagcgag
cctgtcgctataaaaccccagaagcggcgggtcatttcgtcagacgaggatgaagaggca
ccaaaatcgtctccaaaacgttccaaggtcgtgcgaaagacgaagaaatcttctattctg
tccgactctgaagatgaagcattcgtcaaagatgataagaaaaattctagacaatctaag
gcaagtaagaatgaaagtgagaagccacgtgaggcgatgcttcctggtgaattatttggg
aagaaaccgataatgagagtggaagagacaaaagtaaatcaaaaattacagaagatggaa
tctgagtttcacgatgacgaagattttgatgctgtgcttaaacagttggacgcatttcaa
gataccaagcaaaagaataaaaaaaaagataatattaaaaagatttctaagaaatctgaa
gttaaaacagaggtggacattaataaaaaacatgatacttatttgaaagattctaataat
ggaattaatataagtacattaaaaactgaggaggtgagaaaatctcctagtaaacataat
gcatgttcaaagatagttacaagttcctctaaaaaattacaaaaagcaattaaaagtagc
actaatggagatttagatataagcgatgagtataatgagagctctaaacaattgaatttc
gacaattcaacatctacctctgcatcagaagaagataaaaatacagaaagatcaagtaga
aaaaaagccaaaacaatggatttatttgaagaaagaatagaaaagaagaaacagcgtgct
ataatgtacgaaaaatatcttcagcgaggtggcgccagaaatcctggttcaaaagagatt
cctacaggtgccacaaattgtttaaccggcctaagttttttgattactggtgttttggat
tccttagaaagagacgaagccgaggatttaatacggaaatatggtggccggaccgtaaac
tctgtatcgagcaaagtaaactacattatagtgggtgatgaggctggcccagccaaattg
gcaaaagccaatagtataggtattaaacagatatgcgaggatgattttctagaaatgatt
cgcacgagaccagaaggtagagctgaagatatcaagcctgtgataaagaaatcaaacata
aaaaaatcattgaataaatctgaaagtgataaattattattactgaacgaaacatcattt
tcaactaaaaaagtaaaaacaccctcatcttcaccagtaaaaacagaaatattgccatca
gtatcgaaggaagcttctgatatgagtaataacatacaaaagatgattacaagtgttggc
tcagaaccattagttgagaagtacagacccaaaactatgaagcagatcataggtcagcaa
ggagacaaaagttgtgcacacaacttgtacatatggctacgtgattggcataaaaaccgt
caagatcctaaagtcaaaaacggcactgccaaacaaacccatggacaaagttttaaagct
gcgttgctgtccggtccaccgggtgttggcaaaacaacaactgtgcaagttgtttgtaaa
gaattgggatatgatcttgtggaattcaatgcttccgacacgagaaacaagacgctttta
aaagaagcggtctcgggattgttatccaatactacgatgaaggattatgttacaggtacc
aaacaaaaaattacaagcaaacatgtgttgttgatggacgaggttgatggtatggctggc
aacgaagataggggtggtttacaggaattagttggtttaataaaatctacagaagtacca
ataatctgtatatgtaatgatcgatttaatacaaaagtgaaaaccatttctacgcatagc
tatgacctgaaatattcgaagctcagagtggaacagattaggagttctatgaaatccttg
tgctttaaagagaacattaaaatctcgacggaggatctcgatcgtttaatcgagtcgacg
aattatgatattcgacaagtaataaatcatctggagtttcttggcagtcaaacatctcac
acggaaaagaccgataaaaagtattcgaacaagaacttcaagctaggtccatttgatgtt
acaaaaatggcatttaatgcagaggagcaaaaaaatatgagtctgaatgataagattgct
ttatacttccatgattacaatataacgccactttttatacaagaaaattatccaagcgtt
agagtacttcaagcgtcacttcatcagagactagaaaaaattgccgacgcggctgatagt
atatctcaaggagacttaatcgaaaaagtaatgagaagcaatatgatgtggagtctactt
ccgatgcatgcttgtttttcgttcgttataccgacaagcaaaatgtcaggttgctctgaa
ccattgatacgattcccaagctggtttggacgaaattcgaaagcaacgagatttaaccga
ttaatgcaagagttgacgacgcatacgcgattagctacgggtgcaaacaaggatgctctg
aatatggattatttgccccatattcgaaacgccattgtaaaacctctaatagataatggt
gtggatggtatagaagcagcgataaatattatgggaaaatactatttaaccagggaagat
ttagattcagcaatagaaatttctctttggccaggaatttgcgatcctacgagtaatctt
gatagtaaggtaaaagctgcgttcacgcgggcatatcaaaagaatcctcctatactgcca
tacgcatttaataccactgctacagcaaagaaaagatctatgcagaacaacgattttatg
acagaagaagatgatgaggaagaaactgacgatattgattttgataagatgattaaggct
aagaaacctaatactagcaaagctgctgctagttctagtaaaactgcatcgacgaagaaa
ggcagcgaaccagctaagaaacgtggaaaaggacgcggtaaaataaaatag
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