Monomorium pharaonis (pharaoh ant): 105836497
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Entry
105836497 CDS
T05760
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105836497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105836497
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
105836497
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
RHA1_ro05818_N
Motif
Other DBs
NCBI-GeneID:
105836497
NCBI-ProteinID:
XP_012536012
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Position
9:16419298..16425292
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AA seq
714 aa
AA seq
DB search
MTENKTEFDWGNEKLQRAQKTVDESPYDLEAWSILIREAQNRPITEVRPVFDKLVSVFPS
AGRYWKIYIEQEMKMRNFEKVEKLFQRCLMKILNIELWKLYLSYVKETKASLTTYKEKMA
QAYDFALDKIGMDIHSYSIWNDYVMFLKSVEAVGSYAENQKISAVRKVYQRGVINPMINM
EQLWKDYMSFEQNINPIIAEKMAIERSRDYMNARRVAKELEAVTRGLNRSAPSVPPTGHP
EEVKQVELWKKYIAWERSNPLRTEDTSLVARRVMFAIEQCLLCLGHHPAVWHQAAHFLEL
SSKILTEKGDVNAAKNLSDEAATMFERATSTLLSKNMLLYFAHADFEEGRVKYEKVHQIY
QKFLDIPDIDPTLAYVQYMKFARRAEGIKSARTVFKRAREDTRCKHHVYVAAALMEYYCT
KDKNIAFRIFELGLKKFGDNPDYILCYIDYLSHLNEDNNTRVLFERVLSSGSSLEPEKSV
DIWNRFLEFESNIGDLASIVKVEKRRSAVLEKIKEFEGKETAQLVDRYKFLDLYPCTPME
LRSIGYMDVSSVARNSIGVVPRVPDPEEAIAALPRPDLSQMIPYKPKVNPLPGEHPVPGG
TFPLPPAAAQLCTMLPPPGCFRGPFVAVDLLMDVFSRIQLPDHAPLPVADNGCDTKLFDL
AKSVHWIVDESNDGMSIGSKRRRTRLGGDDSEEEDLPPPPINDIYRQRQQKRVK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaacaaaacagaatttgattggggtaatgaaaaattgcaacgtgctcagaag
actgttgatgaatcaccatatgatttggaagcatggagcatacttataagggaagcacag
aacagaccaatcacagaagtaagaccagtattcgacaagctcgtttcagtatttccatcg
gctggacgttattggaaaatttacatagaacaagagatgaaaatgcggaactttgagaag
gtagaaaagcttttccaaaggtgcctcatgaaaatattaaatattgaattgtggaaacta
tatctttcttatgtcaaagaaacgaaagcgagtctaaccacgtataaggagaagatggca
caagcatatgattttgcattggataaaattggcatggacatacactcttacagcatttgg
aatgattatgtcatgtttttgaagagcgtcgaagcggttggatcatatgcggaaaatcaa
aaaatcagtgctgtacgaaaggtttatcaacgaggcgttattaatcccatgataaacatg
gagcagttatggaaggattacatgtcgttcgagcagaacattaatccaataatcgcggag
aaaatggccatcgaaagatctagagattatatgaatgctagacgcgtcgctaaagaattg
gaagcggttactagaggtttgaatcgaagtgcacccagcgtacctccaactggtcatcct
gaagaagttaaacaagttgaattatggaagaaatacattgcatgggaacgaagtaatcct
ctaagaacagaagatacatccttggttgctcgaagagtcatgttcgcgattgaacagtgt
cttttatgtttgggtcaccatcccgcggtatggcatcaagcagctcacttcttagagctg
agttctaaaatactgacggagaaaggtgacgtgaatgcggccaaaaatctcagcgatgag
gccgctaccatgtttgagagagcgacaagtacgttgttgtcgaaaaatatgttgctgtat
tttgcacacgcagacttcgaggagggtagagtgaaatacgagaaagtgcaccaaatatat
caaaaatttctcgatatacctgacatagatcctactttggcgtatgtgcaatatatgaaa
tttgcaagaagagccgaaggtataaaatctgcaaggacagtattcaaacgagcacgggaa
gacacaagatgtaaacatcatgtttatgttgctgctgcgttaatggaatattattgcact
aaagataaaaatatagcattccgtatatttgaattagggttaaagaaatttggagataat
cctgattacattctttgttacatagattacttgtcacatttaaatgaggataacaacaca
agagttctattcgagagagtattatcttctggctctagtttagaaccagagaaatcagta
gatatatggaatcgtttcttagagttcgaatctaatattggcgatctagctagtattgtc
aaagtcgagaagagacggagtgcagtactggaaaagattaaggaattcgaaggaaaagaa
acagctcaattagtagacagatataaatttttggacttatatccgtgtactcctatggaa
ttgagatcaattggatatatggatgtctccagcgttgctagaaattccattggcgttgta
ccccgagtacctgatccagaagaagcgattgccgctttgcccagacctgatttgtcgcaa
atgataccatataagccaaaagtaaatcctttacctggtgaacatccggtaccaggtggt
acgttcccgttaccaccagccgcagctcaattatgtaccatgttgccgccacctggctgc
ttcagaggcccgttcgttgctgttgatttattgatggatgttttcagtagaattcaatta
cccgatcatgcaccgttgccagtggcggataatggatgcgacaccaaattgttcgatctt
gcgaaatctgtacattggatcgtcgacgaaagtaatgacggtatgagcatcggatcaaag
cgtagacgaacgcgtttaggtggtgacgacagtgaagaagaagatttaccacctccacct
ataaatgatatttatcgccaaagacaacagaagcgagtcaaataa
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