KEGG   Monomorium pharaonis (pharaoh ant): 105836655
Entry
105836655         CDS       T05760                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
mpha  Monomorium pharaonis (pharaoh ant)
Pathway
mpha03030  DNA replication
mpha03410  Base excision repair
mpha03420  Nucleotide excision repair
mpha03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mpha00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105836655
   03410 Base excision repair
    105836655
   03420 Nucleotide excision repair
    105836655
   03430 Mismatch repair
    105836655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mpha03032]
    105836655
   03036 Chromosome and associated proteins [BR:mpha03036]
    105836655
   03400 DNA repair and recombination proteins [BR:mpha03400]
    105836655
DNA replication proteins [BR:mpha03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105836655
  DNA Replication Termination Factors
   ELG1-RFC complex
    105836655
Chromosome and associated proteins [BR:mpha03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105836655
DNA repair and recombination proteins [BR:mpha03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105836655
  Check point factors
   HRAD17(Rad24)-RFC complex
    105836655
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 RuvB_N AAA_16 AAA_14 AAA_11 AAA_5 DUF815 ResIII AAA_24 AAA_19 AAA_30 DEAD AAA_7 AAA_assoc_2 TniB ATPase_2 PhoH RCF1-5-like_lid Mg_chelatase AAA_13 FtsK_SpoIIIE TIP49 bpMoxR nSTAND3 MCM AAA_25
Other DBs
NCBI-GeneID: 105836655
NCBI-ProteinID: XP_012536295
LinkDB
Position
3:11861929..11863700
AA seq 328 aa
MTSSNEQLVNLPWVEKYRPKSLDDLISHETIIKTINKYIDENQLPHLLLYGPPGTGKTST
ILACARKLYTPAQFNSMVLELNASDDRGIGIVRGQILSFASTGTMYKSKFKLIILDEADA
MTIDAQNALRRIIEKYTDNVRFCIICNYLSKIIPALQSRCTRFRFLPLAAEQIVPRLNHV
IEAENLKVTEDGKEALMTLSGGDMRKVISVLQSTWFAYGKVNQENVYNCVGHPLPRDINN
IVNWLLNDSYDTCYRKIQELKLNKGLALQDILTEIHACVVKIDFPDPIFIDLLCRMAEIE
KRLASGCRDAIQVNSLISAFYKVRDIET
NT seq 987 nt   +upstreamnt  +downstreamnt
atgacgtccagcaacgaacagctcgtgaatttaccatgggtcgaaaaatatcgtcccaag
agcttggacgatctcatctcccacgagacaataataaagacgataaacaaatacatcgac
gagaatcaattgccgcatcttctcctgtatgggccacctgggacagggaagaccagcacc
atactggcgtgtgctcgtaaactttatactccggctcagtttaattcaatggtgctagaa
ttgaatgcttctgatgacagaggcataggtatcgtgcgaggccagattctgagttttgcc
agtactggaaccatgtacaaatccaagtttaaattaattatcctggacgaggccgacgct
atgacgatcgacgctcagaacgcactcagaagaatcattgagaagtatacggataatgtg
cgtttctgtattatatgcaactacctcagcaagatcatcccagcattgcagtcgcgttgc
accaggtttagattcctgcctcttgcggcggagcaaattgtgccaagactgaatcacgtc
attgaagcagagaacttaaaagttacggaggatggaaaagaagcactaatgacattgagc
ggcggcgatatgaggaaggtgataagtgtgcttcaaagtacatggttcgcttacggtaag
gtgaaccaggagaatgtatataattgcgttggacatccgttaccaagggacataaataat
attgtaaactggctgctaaacgattcttacgacacatgttataggaagattcaagagcta
aaattgaataagggacttgcgctgcaagacatattgacagaaattcacgcgtgcgtagtt
aaaattgattttcccgatccgatatttattgatttactgtgcagaatggcagagatagag
aaaagactggcttctggatgtcgcgatgctattcaagtaaattctctcatatctgcattt
tacaaagttcgtgatattgaaacgtga

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