Monomorium pharaonis (pharaoh ant): 105836655
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Entry
105836655 CDS
T05760
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03030
DNA replication
mpha03410
Base excision repair
mpha03420
Nucleotide excision repair
mpha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105836655
03410 Base excision repair
105836655
03420 Nucleotide excision repair
105836655
03430 Mismatch repair
105836655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpha03032
]
105836655
03036 Chromosome and associated proteins [BR:
mpha03036
]
105836655
03400 DNA repair and recombination proteins [BR:
mpha03400
]
105836655
DNA replication proteins [BR:
mpha03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105836655
DNA Replication Termination Factors
ELG1-RFC complex
105836655
Chromosome and associated proteins [BR:
mpha03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105836655
DNA repair and recombination proteins [BR:
mpha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105836655
Check point factors
HRAD17(Rad24)-RFC complex
105836655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
RuvB_N
AAA_16
AAA_14
AAA_11
AAA_5
DUF815
ResIII
AAA_24
AAA_19
AAA_30
DEAD
AAA_7
AAA_assoc_2
TniB
ATPase_2
PhoH
RCF1-5-like_lid
Mg_chelatase
AAA_13
FtsK_SpoIIIE
TIP49
bpMoxR
nSTAND3
MCM
AAA_25
Motif
Other DBs
NCBI-GeneID:
105836655
NCBI-ProteinID:
XP_012536295
LinkDB
All DBs
Position
3:11861929..11863700
Genome browser
AA seq
328 aa
AA seq
DB search
MTSSNEQLVNLPWVEKYRPKSLDDLISHETIIKTINKYIDENQLPHLLLYGPPGTGKTST
ILACARKLYTPAQFNSMVLELNASDDRGIGIVRGQILSFASTGTMYKSKFKLIILDEADA
MTIDAQNALRRIIEKYTDNVRFCIICNYLSKIIPALQSRCTRFRFLPLAAEQIVPRLNHV
IEAENLKVTEDGKEALMTLSGGDMRKVISVLQSTWFAYGKVNQENVYNCVGHPLPRDINN
IVNWLLNDSYDTCYRKIQELKLNKGLALQDILTEIHACVVKIDFPDPIFIDLLCRMAEIE
KRLASGCRDAIQVNSLISAFYKVRDIET
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccagcaacgaacagctcgtgaatttaccatgggtcgaaaaatatcgtcccaag
agcttggacgatctcatctcccacgagacaataataaagacgataaacaaatacatcgac
gagaatcaattgccgcatcttctcctgtatgggccacctgggacagggaagaccagcacc
atactggcgtgtgctcgtaaactttatactccggctcagtttaattcaatggtgctagaa
ttgaatgcttctgatgacagaggcataggtatcgtgcgaggccagattctgagttttgcc
agtactggaaccatgtacaaatccaagtttaaattaattatcctggacgaggccgacgct
atgacgatcgacgctcagaacgcactcagaagaatcattgagaagtatacggataatgtg
cgtttctgtattatatgcaactacctcagcaagatcatcccagcattgcagtcgcgttgc
accaggtttagattcctgcctcttgcggcggagcaaattgtgccaagactgaatcacgtc
attgaagcagagaacttaaaagttacggaggatggaaaagaagcactaatgacattgagc
ggcggcgatatgaggaaggtgataagtgtgcttcaaagtacatggttcgcttacggtaag
gtgaaccaggagaatgtatataattgcgttggacatccgttaccaagggacataaataat
attgtaaactggctgctaaacgattcttacgacacatgttataggaagattcaagagcta
aaattgaataagggacttgcgctgcaagacatattgacagaaattcacgcgtgcgtagtt
aaaattgattttcccgatccgatatttattgatttactgtgcagaatggcagagatagag
aaaagactggcttctggatgtcgcgatgctattcaagtaaattctctcatatctgcattt
tacaaagttcgtgatattgaaacgtga
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