Monomorium pharaonis (pharaoh ant): 105836663
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Entry
105836663 CDS
T05760
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105836663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpha03021
]
105836663
03036 Chromosome and associated proteins [BR:
mpha03036
]
105836663
Transcription machinery [BR:
mpha03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105836663
Chromosome and associated proteins [BR:
mpha03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105836663
PBAF complex
105836663
GBAF(ncBAF) complex
105836663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_3
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
105836663
NCBI-ProteinID:
XP_012536307
LinkDB
All DBs
Position
1:complement(17569708..17580198)
Genome browser
AA seq
1028 aa
AA seq
DB search
MLSLGPKKDGGPNAKFFEAPEVLTQLDGVKQWLLKNCKKYVQTDPPTNKSLATLLVQLLQ
FQEDNLGKNVSKPPMTRLPMKCFLDFKPGGGVCQILATAYRFKQEQGWRRFDFPGGKSGS
RMDRTMDMLVAAERALIQNRCMTVPSIFVRADVDKNTATKVKDVVRKHQGTVVENEADAT
HIIYPQVDPLEEEYARPCMRRERSVLIHWYYFPDSYDSWLAVDLPWEYPEGTYTNTNSRS
MYKVSATWALDLDQYNEWMNEEDYEVDDNGQKRVHKYRLSVEDLMAQPSHPPPAKKPKRK
RSPSPPPKLGKRKSSRAPSGIQSASSASSATAPKKSRGGEEEEDLTQGMDDPPAEPRIVE
VVATPTNPPIAGQGNATTGNSTLTSTGSKKQDSELQPLKSGNLTDLDEQMEDKGSSQGGQ
DREERDTSKERGESGKGDEPEDNVTEQTHHIVVPSYSAWFDYNSIHTIEKRALSEFFNGK
NKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQ
VDAESRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPSAAKMLLDLEKKPASVTGG
LGTEEKVSAGAMANFGLKIDQYSRKPAVLKNKQAAGATRDWTEQETLLLLEGLELHKDDW
NKVCEHVGSRTQDECILHFLRLPIEDPYLEEGGPEGLGPLAYQPVPFSKAGNPVMSTVAF
LASVVDPRVAASAAKAAMEEFAAIKDQVPAALMDQHLKNVQASANLDGKFDPAAGLAQSG
IAGTGPPEPPDDTATSTATPSVSAGAASSPHSTAPTPEAKKEDQDKSKDAMEVEQSQVDV
TKKEDESKEGEEDAKPTTDPEAAEAKEKKDKVVRDAQLQSAAAAALAAAAVKAKHLAAVE
ERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLK
AAEFRARQQAHQRLAQQQEQQQQQQQQQQQPQQHPPWQPPGAQQQQQPPSPQAQPQQQPP
SHTPPQQT
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgctaggcccgaaaaaggacggcggacccaacgccaagttcttcgaggcgccg
gaggttctcacccagcttgacggcgttaagcagtggctgctcaagaactgcaagaagtat
gtacaaacggatccacctactaacaagagcttagccacattgctggtacagcttctacag
ttccaggaggacaatcttgggaaaaatgtgtcaaagccacctatgactaggcttccaatg
aaatgcttcctggattttaaacctggtggcggtgtatgtcagatattagctactgcttat
cgttttaagcaggagcaaggatggcgacgctttgattttcctggtggaaaatcgggatct
cgtatggatcgtacgatggacatgcttgtggcggcggaacgtgctttaatacagaataga
tgtatgactgtaccaagtattttcgtgagagcggacgttgacaagaacacagctacaaaa
gtaaaagatgtagttagaaagcatcaggggactgtcgtggagaacgaggcagatgctaca
cacatcatctatccacaagtggatccattggaagaggaatacgcgcgaccctgcatgaga
cgcgaacgatcggttctaatccattggtactactttccagacagttatgattcatggctg
gcagtggatcttccgtgggaatatcccgaagggacttacacaaacacaaattcaagatca
atgtataaagtatcggctacatgggcgttagacttggatcaatataatgagtggatgaac
gaagaagattacgaggtagacgataacgggcagaaaagagtacataaatacaggctctcg
gtggaagatttaatggcgcagccatctcatccgccacccgcaaagaaacctaagaggaaa
cgatcgcccagcccgcctccgaagctcggtaaacgtaagagtagcagagcaccgtcgggt
attcaaagcgcttcttccgcgtcatcggcaacggcaccgaagaaatcacgtggtggcgag
gaagaagaagatttaactcagggaatggacgatcctcctgcagaaccccgtatcgtcgag
gtggtcgctacgccgacgaatccaccgattgcgggtcaaggtaatgcaacaacgggtaac
tccacgttgacgtctaccggtagcaagaaacaagacagcgagcttcaacctctcaaatct
ggcaacttgaccgatcttgatgaacaaatggaagataaaggaagctcccaaggaggccaa
gatagagaggagagagatactagtaaagaaaggggtgaaagcggcaaaggcgacgaaccg
gaagataatgtgacggaacaaacgcatcacatcgttgttcccagctactccgcctggttt
gattacaattcaattcacaccatagagaagcgagctctatcggaattctttaatggcaaa
aataagtccaagactccggaaatttatcttgcgtatcggaattttatgatcgacacttat
cgattaaatccaacggaatacattacttcgactgcctgcaggcggaatttagccggagat
gtatgcgcgattatgcgcgtgcacgcatttttagaacaatggggactcattaactatcaa
gtggacgcagaatctagaccgacgccaatgggacctccaccaacatcgcatttccacgtt
ttgtcggacaccccgtctggtttggcaccagtcaatccaaatccgccgaaaacaccgcaa
ccatccgccgccaagatgttgctcgatttggagaagaaaccggcgagtgtaacaggcggc
ctaggcacagaggagaaagtttcggcgggcgcgatggcaaactttggtttgaaaatcgac
caatattcgaggaagccggcagtgctaaagaacaaacaagcagcgggtgccacgcgcgat
tggacagaacaggagacgcttttactattggaaggattggaattacacaaggacgattgg
aataaagtatgcgaacacgtaggttcgagaacgcaggacgagtgtatcttgcacttttta
cgtttacctatagaagatccgtacttggaagaaggcggacccgaaggattgggcccctta
gcttaccaaccggtaccattctcgaaagctggtaatcctgttatgagtacagtcgccttt
cttgcgtcggtcgtggatcctagagtagccgcgagtgcggcaaaggcggctatggaagaa
tttgccgcgataaaagatcaagtgccagctgctttaatggatcagcatttaaaaaatgtt
caagctagcgccaatttagatggtaaattcgatccagcggcaggattagcacaatcgggt
attgctggcacaggaccacctgaaccgcctgacgatacagcgacttccactgcaactccg
tccgtatcggcaggtgcagctagttctcctcattccacagcgccgactcctgaagcgaaa
aaagaagaccaagataagtctaaagacgctatggaagtcgaacaatctcaggtagatgtt
acgaagaaagaagatgaatcgaaagaaggcgaagaggacgcaaagccaaccactgatcca
gaggctgcagaagcgaaagagaagaaagacaaagtcgtaagagacgctcagctccaatct
gcggcggctgcagcgttagctgccgcagctgttaaagccaaacatttagcagctgtagag
gaacgtaagatcaaatcattggttgcgttattagttgagacgcagatgaagaaactggag
atcaaactgcgtcatttcgaggaattggaaactacgatggagcgagagcgtgagggtctt
gagtatcagcgacaacagcttattactgagcggcaacaattccatctcgagcaactgaag
gcagctgaattcagagcacgtcagcaagcccaccagcgattggctcaacaacaggaacaa
cagcaacaacagcagcagcaacaacaacaacctcaacaacatccaccttggcaaccaccc
ggtgcacaacaacagcaacagccaccaagtccgcaggctcagccgcaacaacagccacca
tcgcacacgccaccgcagcagacataa
DBGET
integrated database retrieval system