Monomorium pharaonis (pharaoh ant): 105836792
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Entry
105836792 CDS
T05760
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03008
Ribosome biogenesis in eukaryotes
mpha03013
Nucleocytoplasmic transport
mpha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105836792
03015 mRNA surveillance pathway
105836792
03008 Ribosome biogenesis in eukaryotes
105836792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105836792
03009 Ribosome biogenesis [BR:
mpha03009
]
105836792
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105836792
mRNA cycle factors
Stress granule specific factors
105836792
Ribosome biogenesis [BR:
mpha03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
105836792
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
NTF2
LRR_8
Tap-RNA_bind
LRR_4
Motif
Other DBs
NCBI-GeneID:
105836792
NCBI-ProteinID:
XP_012536527
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All DBs
Position
11:complement(907168..910990)
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AA seq
531 aa
AA seq
DB search
MKKQEKLQPNTPVVPITLDTAITIRIAMGAKMPHERGLMNRADMWHKIKVVKGGLYDKDT
VLKGILKAVEPNDLIPVKYQVCGEDGYFVCRNCGPALEMLCKANMIVKNANGDALILVVT
LGFSSINDLRIHIQPLLLTALTKRYNPNRRTLNLENFHTDPNIQNIVFCPLSQPRTSNHV
LKLASTAIATFENLNLQHNELLSISTEISSLTSVKYLDLRNNSLLNMNVLMPLRNLEILK
LWLDGNPLCENYSTAKQYVDSAKKYCPYLQELDGVCIVENMPLIYKDYFTDDKSQHFAYT
FVTHFFGLFDQLDRTVLRGLYHKDAFYSMSFAIPHNIAQKTGLNQYLSNRNLLRKGQKKH
TTDKHLYRGQEDILAAFSKLPRSYHDKTTFTYDIMYQDDNCKVFSVSGLFKKLSSGTNVL
SFSRTFILLASADNEYHILNDQYHIFAAPANMTPDRIVVKYTYDEVEPVCFSPSEKSVLI
TRMQQITKMNKEWSENYLSEAQWDMRKAIYSFMKDLKDSTIPNQAFAPQSS
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacaggaaaagttgcagccaaatacacccgttgtccctattactttggacaca
gctatcactataagaatagctatgggtgcaaagatgcctcatgaaaggggactgatgaat
cgcgcggatatgtggcacaaaatcaaagtggttaaaggcggcctgtacgacaaggacaca
gtcttgaaaggcatcctgaaggcagtggagccaaacgatctgataccggtgaagtatcag
gtttgtggagaagatgggtattttgtctgcagaaattgcggtcctgcgctagaaatgcta
tgcaaggcgaacatgatcgtgaagaacgccaacggcgacgcgctcattcttgtggtaacc
ctgggattctcttcgatcaatgatctgagaatccacatacagccccttctgttgaccgca
ctgacaaagcgatacaatccgaaccggaggacactgaacctggagaactttcacacggat
ccgaatatacagaatattgtgttttgtcctttgtcgcaacccagaacttccaatcacgtt
ttaaagctggccagtaccgcgatagccaccttcgagaacctgaacctgcagcacaacgaa
ttgctcagcatatcgacagaaatttccagtctgacgtccgtcaagtatctggatctgagg
aacaacagtctgttgaacatgaacgtgctaatgcctctgagaaatctggaaatcctgaaa
ctctggctcgacgggaatccgctttgcgaaaattactcgactgcgaagcaatacgtcgac
tccgcgaagaagtactgcccgtacttgcaggaattggacggcgtgtgcatcgtagaaaac
atgccgttgatatacaaagactatttcacagacgacaagtcgcagcactttgcctataca
tttgtcacgcatttttttggtctgttcgatcagctcgacagaacggtcctacgggggctc
tatcacaaggacgcgttttactccatgagcttcgccataccccacaacatcgcgcagaag
accggccttaaccagtatttgtcgaacagaaacctgttgagaaagggccagaagaagcat
acgacggacaaacatctctaccgcggccaggaggacattctggcggctttcagcaagttg
ccccggtcctaccacgacaagactaccttcacttacgacattatgtaccaagacgacaac
tgcaaagtgttcagcgtctcgggattgttcaagaaactgagttccggtacgaacgttttg
tcgttctctagaacgttcatcttgttggcctccgccgacaacgagtaccacattttgaac
gatcagtatcacatattcgcggcaccggccaacatgacgcccgacagaatagtagtcaag
tatacttatgacgaggtggagccggtttgcttcagtccgagtgaaaaatcagtactaatc
accagaatgcagcagatcacgaagatgaacaaggaatggtccgagaattatctgtcggaa
gcccagtgggacatgcggaaggcaatatatagcttcatgaaggacctcaaggattcgacg
ataccgaaccaagcatttgccccgcagagctcgtag
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