Monomorium pharaonis (pharaoh ant): 105836836
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Entry
105836836 CDS
T05760
Name
(RefSeq) nucleoporin NUP188 homolog isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105836836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105836836
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105836836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N
Motif
Other DBs
NCBI-GeneID:
105836836
NCBI-ProteinID:
XP_012536594
LinkDB
All DBs
Position
3:complement(1282416..1289675)
Genome browser
AA seq
1935 aa
AA seq
DB search
MEVAPMGNLSCSKELWSIISSTTCCCAKETVEEEIKNSTVLLKEGLQFFKPYTDASLQSI
SKRDPPPLQQMYDLISKLAPLLNLDATITWDLVCNFVSYEYRNCAETFASQLSDLTSTRA
LIDDIWNFYYSERITLIKCLKLMIEYKDNKRHPHHKEFTEFFNEVLMGNLLESVRKQIEA
LKFINSPTRSQFCTEDHLHRLYNSTLIEMRELLHILTVIIHDVHIPSNEFAKLYGSIGGE
PRRLVSTKSHEDKEAITKKLEEIQYSQTALLLVTLDIDKHTGMEDWINGVRNDMQEIFEH
KCVRENLTQDGPLLLSWMLANYAIDPDNMDTLNRFKPFGIKAIQLDVFQYLRDLINCEMF
QEETHYAEVVQSSIYNLLSLVCVFVDEDRLNALTGIFDALAAIVKFPECAAKFWDEPCDS
IRTIYKVAKEVYPYKFEPLTNIAIGLASTTITSAKKIASELDNLQTVTIEIPRQRDYNKP
LQPYEVDCIIHKNSFTIPSNCVRENITVLSNEKEVVLFRTKASYWDALHHKIEQLFSQAS
GGIMNVSAVKTDLPENVCQGLKLLEALLTQDIEIPSSMVAPTELSLEIINRFSYPVLPTN
LYRIVAVCISISSKLVLRYPEDIISRMRSGVYPKFNNWDQKPLDFAEAISFDSGLIASWL
SGIETIEHTYPILRAFLDTLYNYLIAKHSKEAMYTIEIPGMVFLLQAVLPKLDSWYFESN
TERIDLWLKSMFCIHRALDSALPKNDIRNELQLVVVYSLLYLEPRHALLKLLRTGERTLH
NKMITETNWINGKGFKVIKSVELALSIVNRLLMFRKSLGLELSDRSPLEIALYSSPRVPN
GLLIVPTIVNYLYVWFSPSLQKMAVRLLKKFAEEFSMSLLVCMGMDGTSIRETFAFRLTL
PTCAIEVKVAILELVAVCLEKQPGLTEALFNIMHQAERKRIFPRPADEFLTEGCSQFLDS
YLERMYKEDDIVCDKLYDSTMTVLRAMWYHRNEILVNFFRKREKFWSHLFAPLFKPLVAG
AKGYSQLLDVITLELYKSPLLENNFSKSLRELLDKSKDHWKKLAMYVLDVSANGEGENNR
EQHTGQNRLIEPLYEINLESWYHFIVMLTDDRTAKNYPINVTQAHLLTQLALDSLLKRVK
ESISDVSSGKIPMLLASLSLRCITSWKQMCVGDSRIFKTRLSQLTQEIAQTYRGFGKALR
QTMISLLLGCVQLVKSTLAEDSASLEYLLAHSCTIAICELEELKEAALQLERRKQQFSVD
LKTDEKGTQKKADCAQSAEALRGMRESLPATLAISMVTQLLRSYVERNVNFKHHLRASCV
QLRQMIPELMVCVGYTLQKYPYLKFSAAAMSLLGVISRSPYCPYPINNNDITKLWLGLIP
PADIANSMLDSLYDDSANGQWRCQDWWPLYTLGLEFLVGLVNSETRMMFVNHVVVFLNSH
EHQLMVVSTLLRHTADLLAADLIQSLVALIHAIATQTYVWNAIEPSVRDTLIKCMYLAYD
STVNLLLRPRILKFIIDGISVESAEELESCDNRLPSGELKLLVNKLIVINTTCALSFVHF
SPKLNTLVDTIYTQDYWYTPMAEMNFGPPQMSMSSGPQLTYGTIISSTQLFTQALHSRSQ
PVVTSLPASSTSQPGGREDKTDSAKKEWERAAPENLRRMHTSKDLRRIIHAASGSSTSRT
SSNIAGEFLGYVSGLDVTVPLLSSPRLLRRPYDPLICENTILSRATALATGRHVTKSSGS
GAAGVTPGNGNGPIVVRNHRFSDPWFESMDENNTRLALEINLVLILSQALEGVKNPRLAL
RDRQLIARETDTELGVFFEFLEHRGTPDIWQVKGSLIDADTRSSRTIQDTSDPTQTNLLA
RLQKESTIDKAPVCLADHESFSMPTYRTETQEKRLDDSVLTTGVFKTNVSSVQFLPLMGK
LLKTVVESLDSAQFR
NT seq
5808 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggctccaatgggcaacttgtcttgcagcaaggaactatggtccatcatatct
agcacaacatgttgctgcgctaaagagaccgtcgaagaggaaataaagaacagcactgtt
ttattaaaggaaggacttcaattttttaagccatatacagatgcatcattacaaagcatt
tccaaaagagatccaccacctctacaacaaatgtatgatttgatcagtaaacttgctcca
cttcttaacttggatgccacaattacttgggacctggtgtgcaattttgtgtcctatgaa
tatagaaattgcgctgagacttttgcatcgcagctgtctgatcttacctctacaagagcg
ctaatcgatgatatctggaatttttattactctgagagaataaccctgataaaatgcctt
aaattgatgattgaatataaagataacaaaagacatcctcatcacaaagaatttactgaa
ttttttaatgaagttttaatgggaaatttgcttgaatctgtacgaaagcaaatagaggca
ttgaaatttataaattctcctacgcggtcgcaattctgtaccgaggatcatttacatcga
ttgtataatagtactttaattgaaatgcgcgaattgcttcacatactgactgtgatcata
catgatgtacatatccctagtaacgaattcgctaagttgtatggcagtattggaggtgaa
cctagacgattagtcagtacaaaaagccacgaagacaaagaagctatcactaaaaagctt
gaagaaatacaatacagtcaaacagcgttgttacttgtaacactagatatagataaacat
actggtatggaagattggataaatggtgtcagaaacgatatgcaagagatctttgagcac
aaatgtgtccgtgaaaatttaacacaagatggaccgttacttctatcatggatgctagca
aattatgcgattgatccagacaacatggacacattaaatcgctttaaaccctttggtata
aaagctatacaattggatgtatttcaatatctgcgagatttaataaactgcgagatgttt
caagaagaaactcattatgccgaagttgtgcaaagcagcatttacaatcttctttctttg
gtgtgcgtctttgtcgacgaggatcgattaaatgctttaactggcatttttgatgctctg
gctgccatagtcaagtttccagaatgtgcagctaaattctgggacgaaccgtgcgacagt
atacggacgatttataaagttgccaaagaagtatatccttacaaattcgaaccgttaacc
aatatagctattggtttagcatctacaacaattacgagtgctaaaaagatcgcgtcggag
ttggataatctacaaacagtgaccatagagattcctcgtcaaagggattataataaaccg
ctacaaccatatgaagtggattgtataattcacaagaactcgtttactatacccagcaat
tgcgtgcgcgagaatattaccgtgttgtccaatgagaaggaagtagttttgttccgtaca
aaggcaagttactgggatgccttgcatcataaaatagaacagctattttctcaagcgagc
ggcggaattatgaatgtcagtgcggtgaaaactgacctaccagaaaacgtttgccaaggc
ctaaaattgttggaagcattattaactcaagatatcgagataccgtcgagcatggttgct
cctacagaattaagtttggaaattatcaatcggttctcgtatccggtactaccgacgaac
ttgtacagaattgttgctgtgtgcatcagcatttcgtcaaaattggttttgagatatccc
gaagacattatctcgcgaatgcgatccggtgtttatccaaaatttaataactgggatcag
aagccgttagactttgcagaggcgatttcatttgacagcggtctcatcgcatcgtggctc
tcgggaatagaaactattgaacacacgtatcccattctacgcgcatttctggatacgttg
tacaattatttgatcgcaaagcacagcaaagaggctatgtatactattgaaataccgggt
atggtgtttctgctacaagccgtgctacccaaattagactcgtggtatttcgagtcaaat
acagaaagaatcgatctatggctaaaaagtatgttttgcatccatcgagctctggattcg
gctttgccgaagaacgacattcgtaacgagttgcagcttgttgtagtatatagtctgctt
tacttggagccgcgtcacgcgctactaaaattacttcgcacgggcgagcgcacattgcac
aataaaatgataacggagacaaattggatcaatggaaaaggattcaaggtcatcaagagt
gtagaactcgccttgtccatagttaatcgactcttgatgtttcggaaatctctggggcta
gaattgagcgatcggtcacccctcgaaattgctttgtattcttctccgagagtacccaat
ggacttctcatagtgccgaccatcgttaattatctttacgtttggttcagtccttcgtta
cagaaaatggctgtgagactactgaagaaatttgcagaggaattctcaatgtccttgctc
gtttgcatgggaatggatggcacgtctatacgggagaccttcgcgtttcggttaactctc
ccgacgtgcgcgatcgaagtcaaagtcgctatcttagaattggttgccgtgtgtctagag
aaacaacctggcttgacagaggctctctttaatatcatgcatcaagcggaacgcaagagg
atctttccacgtccagccgatgaatttctcaccgaaggttgcagtcaatttctggactca
tatttggaacgaatgtacaaggaggatgatattgtgtgcgacaaattgtacgacagcacg
atgacagtattgcgcgccatgtggtatcacagaaacgagatcctcgttaatttcttccgg
aaacgagagaagttctggagccatctgttcgcgccacttttcaaacctttagtggcaggc
gcgaagggttattctcaactgttagatgtaattacgttggaattatacaaaagcccatta
ttggagaacaatttctcgaaaagtctgagagagctgttggacaaatccaaggatcactgg
aaaaaattagctatgtatgttctcgatgtttctgcaaacggcgaaggcgagaataatagg
gaacagcacacaggtcagaatagactcatagaaccgttgtatgaaatcaatttggagtct
tggtaccactttatcgttatgctcactgacgatcgaacggcgaaaaattatccgatcaac
gtaacacaggcacatctcctgactcagctggctttagactctctattgaagcgagtgaag
gaatctatcagtgatgttagcagcggcaagatccccatgttgctggcttccttatccctg
agatgtatcacctcctggaaacagatgtgtgttggtgattcgaggatcttcaaaaccaga
ctgtcgcaactcacgcaagagatagctcaaacttatcgtggtttcgggaaggctctacgg
cagacgatgatctcgttactacttggatgcgtgcaactggtcaagagcactctagccgaa
gattcagcgagcctggaatatcttttagcgcactcttgtacgattgctatttgtgaatta
gaggaattgaaggaagctgctcttcaactagaacgtcgaaagcaacaattctccgtcgat
ctgaaaactgacgagaaaggtacgcagaagaaggccgattgtgctcaaagcgcggaggca
cttcgtggtatgcgagaaagtctaccggcgacattggctatcagcatggtgacgcaattg
ttgcgatcgtacgttgaacggaacgtaaatttcaagcatcatctgagagccagttgcgtg
caacttcgtcaaatgatacctgaactgatggtgtgcgtcggttatacgcttcagaaatat
ccgtatctgaagttcagtgcggcggccatgagcctgctgggtgtcatatcacgttcaccg
tattgtccgtatcctatcaacaacaacgacatcacgaagctctggcttggcttgattcca
ccagcggatattgccaacagtatgctcgactcgctgtacgacgactcggcgaacggtcag
tggcgttgccaggactggtggccattgtacacactggggttggaatttcttgtaggtttg
gtcaacagcgaaacgcgcatgatgttcgtcaatcacgtggtggttttcttgaattctcac
gagcatcagttgatggtggtatctacgttgctgaggcacaccgccgatctgctggctgcc
gatctgatacaatcactggtcgccctcatacatgccatagccacgcagacgtacgtttgg
aacgcgatcgagccgagcgtacgcgatactctcatcaagtgcatgtatctggcgtacgac
agtacggtgaacctgctattgcgaccgcggatactcaaattcataatcgacggtatcagc
gtggagagcgctgaggagcttgagtcctgcgacaatcggttgcccagcggcgagctgaaa
ctcttggtaaataagctgatcgtcataaacaccacctgcgcgctgagcttcgtccacttc
tcgccgaaactgaacaccttggtagacacgatatacactcaagactattggtatacaccg
atggccgagatgaacttcggaccgccacagatgagtatgagctccggaccgcagctcacc
tacggcacgatcatcagctcgacgcagctcttcacccaggctcttcactctcgctcgcag
cccgttgttacctcgctcccagcctcctcgacgtcgcagcctggtggacgcgaagataaa
acggattccgcgaagaaagagtgggagcgcgccgcgccggagaatctccggcgcatgcat
acgagcaaggatttacgacgaatcattcacgctgcttccggaagttccacctctagaacg
tcgtccaacattgccggagaattcctaggatacgtcagcggcctggacgtcaccgtgcca
ttactcagcagtcctagactcctgcgtcggccctacgatccgctaatatgtgagaacact
attctatcgcgagcgaccgctctggcgaccggtagacacgtcacgaagagcagcggcagc
ggggctgctggcgtaactccgggtaacggcaacggcccgatcgtagtgagaaatcataga
tttagcgatccatggttcgaatctatggatgagaacaatacgcgattagcactggaaatc
aatctcgtcctaatattgtcacaggctctggaaggggtgaaaaatcctaggctcgctttg
cgagatcgtcagcttatagcacgcgagaccgacaccgagctgggagtcttcttcgaattt
cttgaacatcgcggcactcctgatatttggcaagtgaagggttctctgatagacgcggat
acaaggagctccagaacaattcaagatacgagcgatccgacacaaacgaatttactagct
agactccagaaggagagtactattgataaagcaccggtgtgtttagctgaccacgaaagt
ttctcgatgccgacatatcgaacggaaacacaagaaaaaagacttgacgacagtgtcctc
actactggcgtcttcaaaacgaacgtcagcagtgtacaattcttaccattaatgggaaaa
ttacttaagacagttgtcgagtcgttggactcggcacaattccgataa
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