Monomorium pharaonis (pharaoh ant): 105837020
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Entry
105837020 CDS
T05760
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105837020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpha03021
]
105837020
03036 Chromosome and associated proteins [BR:
mpha03036
]
105837020
Transcription machinery [BR:
mpha03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105837020
Coactivators
SAGA/TFTC/STAGA complex
105837020
Chromosome and associated proteins [BR:
mpha03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105837020
STAGA complex
105837020
TFTC complex
105837020
SAGA complex
105837020
SLIK complex
105837020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
105837020
NCBI-ProteinID:
XP_012536926
LinkDB
All DBs
Position
5:24882240..24888787
Genome browser
AA seq
647 aa
AA seq
DB search
MSENESMYGTTLSQESIKVIAESIGIGNFPDEAAKDLAEDVSYRLKEIIQDAAKFMRHGK
RQRMTAHDIDHALKIKNIEPTYGFFAKDYIPFRFASGGGRELHFVEEKEIDLNEVVAMAG
GQTWPKLPLEITLRAHWLCIDGVQPTIPENPPPVSKEVQKLESVDPTTKLTSKNQNIGVG
KPGGGGKSQKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEARRAEALQSLSAD
PGLHEMLARMCTFIAEGVRVNVVQNHLALLIYLMRMVKALLDNPSLYLEKYLHELIPSVA
TCIVSRQLCMRPEVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQALAKNNQT
PLASLYGAIEGLCELGPEVIKALVIPKIKSVSERIESCIEGQGLSSVDKNGAGHIKTLLV
KSVAPVLKTIRSPPDYVEEYKQDYGYIGPALCTAVAKARTQPTALTTTATTTALTTNQQQ
GSNCTGKTLVQTVSNSSSGQQPGRTIMLGASRSATGTSATGGQKFVILQSRSQTPISNIN
TAINTSTVQQQQQQQQQQQTQAQTQQSQQPQQQQQQVKLAQTNVNQQKTHVQSSTPKLVV
VCMATSGHTNTTSITQQGNLTTKPQSVFVAQQSVERPLSPEEEQSFQ
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaatgaatcaatgtatgggacaactttgtcccaagagtctatcaaagtaata
gcggaaagtattggcattggcaactttccagatgaagctgcaaaagatcttgctgaagat
gtcagttataggctaaaagaaattattcaggatgctgcaaaattcatgagacatgggaaa
cgccaacgaatgactgcacacgacatagatcatgcgttgaagattaagaacattgagcca
acgtatggattttttgccaaggattacataccattccgctttgcatcaggtggaggtaga
gaattacattttgtagaagagaaggaaattgatcttaacgaggttgtagctatggctggt
ggacagacatggccaaagctcccattggaaattacattacgagcccattggctatgcatt
gacggagtacaacctactataccagaaaatccaccaccagtatcaaaagaggtccagaaa
ttggagagcgttgatccaacaactaagctcaccagcaagaatcaaaatataggcgtgggt
aaaccaggcggcggtggcaaaagccaaaagttacgaaacgtcgagactgttcatgtgaaa
caacttgcgacgcacgagcttagcgtggaacagcaattgtactacaaagaaataacagaa
gcgtgcgtgggatccgacgaagctcgtagagccgaggctcttcagtcactctcagcggat
ccgggtctacacgagatgttggcacgtatgtgcaccttcatcgcggagggtgtgcgggtc
aatgtagtacagaatcatcttgcgctgctcatttacctcatgcggatggtcaaagcctta
ctcgataatccaagtctttacttggagaaatatcttcatgaattgataccgtcggttgca
acttgcatagtgtctcgacaattgtgcatgagaccagaggtagacaatcattgggcatta
cgtgattttgcttcccggctgatggcgcagatatgtaaaaatttcaacacctcgacgaat
aatgtgcaaactagagtcacgcgtatgtttagtcaagcattggcgaagaataatcagaca
ccattagcatctctatatggagcgattgaaggactttgtgaactaggaccagaagtgatt
aaagctttggttatccccaaaattaaatccgtctctgagcgtattgaatcatgtatcgaa
ggccaagggctctccagtgtagacaaaaatggagcaggacatattaaaactttgcttgtg
aaatcagttgcaccagttctgaaaacaatacgatcaccaccagattacgtagaagagtac
aaacaagattatggatatataggacctgcattatgcactgcagttgcgaaagctcgcaca
caaccgaccgctttaacaaccacagctacaactacagcactcacaacgaatcagcaacaa
ggttccaattgcacaggaaaaacgctcgtgcagacagttagcaattcaagttcgggtcag
caacctggccgcacaatcatgcttggcgcaagtagaagcgctaccggaacttccgccacc
ggtggacagaaattcgttatcttacaatcccgctcgcaaacacctatttctaatataaat
accgctatcaatacaagtacagttcaacagcagcaacagcaacagcagcagcagcagaca
caggcacaaacacaacaatcacaacaaccacaacagcaacagcaacaagttaaactagcg
caaactaacgtcaaccaacaaaaaacacatgtacaaagttctacaccgaagttagttgta
gtgtgtatggccactagcggtcatactaatacaacatcaataacgcagcaagggaattta
acaacaaaaccgcaaagtgtctttgttgcgcagcagagtgttgaaaggccgctcagtcca
gaggaggaacaatcgtttcagtga
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