Monomorium pharaonis (pharaoh ant): 105837224
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Entry
105837224 CDS
T05760
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03018
RNA degradation
mpha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105837224
09123 Folding, sorting and degradation
03018 RNA degradation
105837224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105837224
03041 Spliceosome [BR:
mpha03041
]
105837224
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105837224
mRNA degradation factors
5'-3' decay
Lsm complex
105837224
Spliceosome [BR:
mpha03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105837224
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
105837224
NCBI-ProteinID:
XP_012537262
LinkDB
All DBs
Position
1:24335473..24337115
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AA seq
96 aa
AA seq
DB search
MASGLESYVNHTVSIITSDGRNFIGTLKGFDQTINIILDESHERVYSTTQGVEQVVLGLH
IIRGDNVAIVGELDDEMDARLDLSTIRADPLSSITH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggattagagagctacgtgaatcatacagtttccatcatcacatcggacggt
aggaattttattggtacactgaaaggttttgaccagaccattaatataattttggacgaa
tcacacgaacgggtatatagcacgacacagggagtagagcaggttgtcttgggattgcac
attatcaggggcgataacgtagcaatagtaggagagctagacgacgagatggacgcgaga
ttggatttatcgacaatacgagctgaccccctaagttctatcacacattga
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