Monomorium pharaonis (pharaoh ant): 105837293
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Entry
105837293 CDS
T05760
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105837293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpha03400
]
105837293
DNA repair and recombination proteins [BR:
mpha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
105837293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
DUF6870
Motif
Other DBs
NCBI-GeneID:
105837293
NCBI-ProteinID:
XP_012537376
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All DBs
Position
3:complement(4353263..4370621)
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AA seq
921 aa
AA seq
DB search
MAVQPNQQFNMDPPTQQSFVRFFKSLPEKLDTTIRFFNRLDYYTVHGNDALFAAQEVFKT
TSVCKMIGAEPHKTEGVILNKNHFETFVRDLLLVKQYRVEVYVNQGTTKNQNWILEYKGS
PGNLSQFEDILFGNNDVAVGVSVIAVKLGTEGKSRVVGLSCVDVISTLISVTEFQDNESF
SNLEALIVTLAPKECLLIQGEGSYEFQTLKQLVERNNVMITLRKKTEFASDSIIDDLNTL
IKFKKGQKQNAQSLPEINLNLAMNATSALIKYLDLTSDEGNINQFKLNQIEQSRYIRLDS
AAIKALNIEPHADTIFNLHGNPVASILTLLDKCRTAQGHRLIAQWVRQPLRDLSLIKERH
DIVELLVQNNELRSVLSDDYLKRIPDLQQLGKKLARKKSTLQDCYKIYLCVSYLPKLMEQ
LSQEHVIALKTMIIDPLKELIDDMDKFQQLVEQTVDLDAAEKGEFMVNPRFADDLKTLKD
AMVETEEAIQRQLNKAANDLCLEAGKTIKLESNQQFGYYFRITLKEEKILRNKKHYTILD
SVKGGVRFRNNKLNELNDDFIDTKNKYLERQKDIIAEIVGIAAGYSDTVRTIGSVLACLD
VLTAFASTAISANKMYVRPKMVPSEEGELNLIQVRHPCLEMQQGVDYIANDIDFKRDQCH
FCIITGPNMGGKSTYIRSVGVTALMAHIGSFVPCDKATISLLDCILARIGADDSQLKGLS
TFMMEMIETAAILKTATCNSLVIIDELGRGTSTYEGCGIAWAIAEHLARDIKSYCLFATH
FHEITKLAEDIPTIKNQHVTALVEDNKLTLLYQVKLGVCDQSFGLHVAKMANFPPDVIEF
AKRKQAELEDYQGIDFEGSNNPQKKQKIIQEGEILISQFLTKCKTLDQSLPDAVLESQIS
SLKEDVLSHKNPYIEALLTAS
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgcaacctaaccaacagttcaacatggatcctcctacgcaacagagctttgtc
agatttttcaaaagtcttccagaaaaacttgataccacgatacgcttctttaatagatta
gactattatacggtacatggaaacgatgctctttttgccgcacaagaagtatttaaaaca
acgtctgtttgtaaaatgattggagctgagccgcataaaacggaaggagttattctcaac
aaaaatcatttcgagacatttgtgcgcgatttgttattagtaaaacaatacagagttgaa
gtttatgttaatcaaggcacgactaaaaatcaaaactggatcttggagtacaaaggttcg
cctggcaatctgtctcagtttgaagatatcttgttcggcaataatgacgtagctgtgggt
gtatccgtaatagctgtgaaactgggtacagaaggaaagtccagagtcgttggcttaagt
tgtgtagacgtcatttcaaccttaatttcggtcactgaatttcaagataacgaatcattt
tcgaatttagaagcgcttattgtaactctcgctccaaaagaatgtttgttaattcaagga
gaaggcagttatgaatttcaaactctcaagcaattagtggaaagaaataacgtgatgatt
actttacgaaaaaaaactgaatttgccagcgattcgattatagatgacttaaacacgtta
ataaaatttaaaaagggacaaaaacaaaatgcacaatcgttacctgaaattaatttaaat
ttagctatgaatgcaacatctgctcttattaaatatttagacttaacatcagatgaaggt
aatataaatcaatttaaattgaatcaaatcgagcagtcacgatatataagattggattct
gcggcaataaaagctcttaacatcgaaccacatgctgatacaattttcaacttacatgga
aatccagttgccagtattttaacattattagataaatgtagaactgcgcagggacaccga
ttgatcgcgcaatgggttcgacagcctcttagggatttatccttaataaaggagcgacat
gatattgttgagctgttagtgcaaaataatgaactgagatccgttcttagtgatgactac
ttaaaacgtataccggatttgcaacagcttggaaagaaactggctaggaagaagtcgacg
ttgcaagattgttataaaatctatttgtgtgtgtcatatttgccaaaactaatggaacag
ctttcgcaagaacatgtgatagcattgaaaacaatgataatagatccattaaaggaactt
atagatgatatggataaatttcaacagctggtagaacaaacagtcgatttagatgctgct
gaaaagggagaatttatggtgaatccaagatttgcagatgatttaaaaaccttaaaagat
gcaatggttgaaacggaagaagccatacagcgacaactgaataaggcagcgaatgacctt
tgcttagaagcaggaaaaacgataaaattagaatctaatcaacaattcggctattacttc
cgtattacgttaaaagaagaaaaaatacttaggaataaaaagcattacaccattctggat
tctgttaaaggtggtgtaagatttcgaaacaataaattaaacgaattgaatgatgatttt
atagataccaaaaataaatacttagagagacagaaagatattattgcggaaattgtagga
attgcagctggctatagtgacacagtgcgtactatcggtagcgtgctggcatgccttgac
gttctcactgcttttgcttctacagcaataagcgctaataagatgtacgtacgccccaaa
atggtccccagtgaagagggtgaattaaatcttattcaagtcagacacccatgtttagaa
atgcaacaaggagttgattatattgctaatgacatcgattttaaaagagatcaatgtcat
ttttgcattattactggtccaaacatgggaggtaaaagtacttatattagatctgttggc
gtaactgcgttaatggcacatattggcagttttgtgccttgcgataaagcaactatatcg
ttattggattgcatattggctcgaataggagctgatgactcccagttgaaaggattgtcg
acttttatgatggaaatgatagaaactgctgctattttaaaaacagcgacatgtaattct
cttgtaataatcgatgagttaggtagaggtacatctacttacgagggttgtggtatagcg
tgggcaatagcagagcatttggcgagagatattaaatcatactgtctatttgccacgcac
ttccatgaaataaccaaattagccgaagatatacccactataaagaatcaacatgttact
gctcttgtcgaggacaataaattgacattactttatcaagtaaagctaggggtttgcgat
caaagttttggtcttcatgtcgctaaaatggctaattttccaccagatgtaatagagttc
gctaaaagaaaacaagctgaacttgaagactatcagggcatagattttgaaggatctaat
aaccctcagaagaaacagaagattattcaggagggtgaaatccttatttcacaatttctc
acgaagtgtaaaactttggaccagtctttacccgatgcggtcttagagagtcagatatca
tcattgaaagaagacgttctctcccacaagaatccttacatcgaagcattactcactgct
tcttaa
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