Monomorium pharaonis (pharaoh ant): 105837409
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Entry
105837409 CDS
T05760
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105837409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105837409
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105837409
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
DUF7347
Motif
Other DBs
NCBI-GeneID:
105837409
NCBI-ProteinID:
XP_012537633
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Position
2:complement(32586846..32590593)
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AA seq
569 aa
AA seq
DB search
MIETDKKGCRELLVQRMILAVVTSVMLQLSLVYCLVLLANLSIDYTRWFEDTWTAVMSPR
MWAYFTVLAIVTFLQGFLCSKNYLHPPPYYKSRFVKLCKTVGIQNLFLRALYIVIGGILV
WLHLSLKRGSFSSTADCNVGYETCLMEEYYFLLFSGFWSGLYLSLKTSNIVGKYFRFPII
AQSKFLQLRQRIYAVLPTLMISSMWSTLYYMAVYYFVRSYYRETLFPMQTEMKPLDALSR
LLNLSLILQLWLYQFIFILIISNTYTLFEIYLTEWASFKFGSSGAYTSDSLEMTLIDVLS
MDKIPIMQHLGYLDLVILAQKEKTRRGMLFTLSQPGGHPYNWNCVVQKCTNLLKKFSSDL
NTISIKSQEQPFCYSTLTARVPPVQQSKYIYHMRKLVPDVAPVLVAETDVREEAPYSGPF
IQKFIKQKKEAFVAYLFSKPLINYIFAEQDDNKIRHALHNGQLVIWAAEAISSLAVFSLS
EDSYGIVQKDVPNIINTVLSVKQALDKLPKSPVLARKMQADEKLILGSLRSAIKRSLYRI
VTNFELYINDLSLEASIIEQLQGFLNYKE
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgattgagacggacaagaaggggtgcagagagctgctcgtgcagcggatgatcctggct
gttgttacgagtgtgatgttgcaattgtctctcgtctactgtcttgttctacttgcgaac
ctgagcattgattatacacgttggttcgaggacacatggactgctgtgatgtcaccacgg
atgtgggcctactttaccgtcctcgccatagtgaccttcttgcagggttttctctgtagc
aagaactatttgcaccctccaccatactacaagagcagatttgttaagctgtgcaagact
gttgggattcaaaacttatttttgcgagcgttgtatattgtcattggcggtatcttggtc
tggctgcacctgtccctgaagagaggaagcttctcaagcaccgcagattgcaatgttggg
tatgaaacgtgtctgatggaggaatactactttttgctgttcagtggcttttggagtgga
ttgtatctttcgcttaagaccagtaatatcgtcgggaaatatttccgatttcccattata
gcacaatccaaatttcttcaactaagacaaagaatttacgctgtgttgccgacgttgatg
atctcctccatgtggtcgactctgtattacatggctgtttattactttgtgagatcatac
taccgtgaaacattgtttcctatgcaaacggagatgaaacctctggacgctttgtccaga
ttactaaatctgtcgttgatattgcaattatggctgtatcaatttatatttatattgatt
atcagcaacacgtacacattattcgaaatatatctgactgaatgggcttcatttaaattt
ggctcgagcggcgcgtacacttccgacagtttagagatgactctcatcgatgtactatcg
atggacaaaataccaataatgcagcacttgggatatttggacttggtcattctggcccaa
aaggagaaaacgagaagggggatgttgtttacacttagtcaaccaggcggtcatccgtac
aattggaactgtgtggtgcaaaagtgtacgaatcttctcaagaagttctcgtctgacctg
aacacgatatctataaaatctcaggaacaaccattctgttatagtacattaacggcgaga
gttccaccggttcagcaaagcaagtacatttatcatatgcggaaattggtaccggatgta
gcaccggtattagtagcagaaacagatgtgagagaggaagctccttacagtggtccgttt
attcaaaagtttattaagcagaagaaagaagctttcgtagcgtatttattttctaaacca
cttatcaattatatctttgccgagcaagatgacaataagattcgtcacgctttacacaac
gggcaactggtgatctgggcggccgaagctatttcgtctttggctgtcttttcgctgagt
gaagattcttatggtattgtgcaaaaagatgtgccaaacatcatcaacactgtgctgtcg
gtgaagcaggcgctggacaaactgccaaagtcacctgtattagcgaggaaaatgcaagca
gatgagaaattaattctcgggtctttgcgtagcgcgattaagcgtagtctatacagaatt
gttacgaactttgaactgtatatcaatgacttgtcccttgaggcttcgataatagaacaa
ttgcaaggctttcttaattacaaggaatag
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