Monomorium pharaonis (pharaoh ant): 105837713
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Entry
105837713 CDS
T05760
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105837713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mpha03041
]
105837713
Enzymes [BR:
mpha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105837713
Spliceosome [BR:
mpha03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105837713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
SLFN-g3_helicase
ResIII
Flavi_DEAD
AAA_30
Cas3-like_C_2
T2SSE
nSTAND_NTPase5
PhoH
TsaE
SRP54
Motif
Other DBs
NCBI-GeneID:
105837713
NCBI-ProteinID:
XP_012538179
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All DBs
Position
2:complement(12467150..12472686)
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AA seq
887 aa
AA seq
DB search
MSKYRREEISSEDTDSEEERRKKDIKERDSFASRLREKDKSKRRNVAMPAGTGAAEAAKR
LKIIETDTRDKLIPKLRIESRRKYLEKRKEDKVAELEADIVDDEYLFDEDVLTERERQER
AHKKQLLHLAKEHEKARELERMQRYHMPLEKGKMEPEQDTAVDKEPPQSEQSKWESDQMS
SAVFRFGAKDRKAQQEYNLLMEDEMIEFVQVLHMPGHRDKKREESPPAHVKSLQTIQETK
KSLPIYPFKKDLIEAIKEHQILIIEGETGSGKTTQIPQYLYEYGFADNDKIIGCTQPRRV
AAMSVAARVAHEMAVKLGNEVGYAIRFEDCTSQRTRIKYMTDGTLHREFLSEPDLASYSV
MIIDEAHERTLHTDILFGLMKDIARFRPDLKLLISSATLDATKFSEFFDYAPIFRIPGRR
FPVDIYYTKAPESDYIDACVVSIIQIHITQPSGDILVFLTGQEEIETCQESLQEKVRTLG
SKMAELLILPVYANLPSDMQIKIFQPTPPGARKVVLATNIAETSLTIDNIVYVIDPGYAK
QNYFNPRTGMESLIVVPISKASANQRAGRAGRVAPGKCFRLYTAWAYQHELEDNTIPEIQ
RINLGNAVLTLKALGIDDLMHFDFLDPPPPETLILAMEQLYALGALNHRGELTKLGRRMA
EFPLDPMMAKMLLASEKYRCSEEVATIAAMLSVNGAIFYRPKDKIIHADAARKNFHVPGG
DHLTLLNVYNQWAQSDFSTHWCYENFIQHRSMKRARDVREQLVGLMQRVEMELVSGITET
VNIRKAITAGYFYHVARLSKGGSYKTAKHNQQVAIHPTSSLVQEIPRWLLYHELVLTTKE
YMRQVTEIESKWLLEVAPHYYKPKEIEDSTNKKMPKVAGRSRPDGTN
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagtacaggcgagaagaaatctcgagcgaggatacagatagtgaggaagaacgt
cgcaagaaagatatcaaggagagagacagttttgccagtcgtctcagggaaaaagataaa
agtaaaagacgcaacgtagccatgccagctggcactggcgctgccgaagcagcaaagagg
cttaaaattatagagactgatacaagagacaagctgatacctaaattgagaattgagtct
cgtaggaaatacttggagaaacgtaaagaggacaaggttgcagagttggaggctgatatt
gttgatgacgaatatctctttgatgaagacgttttaacagagagagaaagacaagagagg
gctcataagaaacagttgttgcacttggcaaaagagcatgagaaggcaagggaacttgag
cgtatgcagcgctatcacatgccccttgagaagggtaagatggaaccagaacaagataca
gcagtggataaggaaccaccacaatcggaacaaagcaaatgggaatcggatcagatgtcg
tcagcagtttttcgttttggcgctaaagacagaaaagctcaacaagagtataatcttctc
atggaggatgagatgatagaatttgttcaagtgctgcatatgcccggacatagggataag
aaacgtgaggagagtccacccgcacatgttaaaagtttacaaacgatacaggagacaaag
aagagtttgcctatttatccttttaaaaaggatttaatagaagctatcaaagaacatcag
atcttgataatagagggtgagacgggatcagggaagacaacacagattccacaatatcta
tatgaatatggatttgcggacaatgataagataatcggatgtacacagccacgacgagta
gcggccatgtcagtagctgcgagagtagcccacgaaatggccgttaaactaggcaacgag
gttggttatgctattcgttttgaagattgcacgtctcaacgtactcgtatcaaatatatg
actgatggtacattgcaccgagaatttctcagtgaacccgatctagcatcatacagtgta
atgataatcgacgaagcgcacgaacgaactttacatactgacattttatttggactaatg
aaagatattgcgaggtttcgtcctgatttgaaactgttaatatcatcggctacattagac
gctacaaaattcagtgaattcttcgactacgctcctatatttaggatacccggacgccgt
tttcctgttgatatttattacacaaaagcgccggaatcagattatattgacgcatgtgta
gtttccatcatccaaattcatataacgcaaccgtcaggtgatatattggtatttctgact
gggcaagaggaaatcgagacgtgtcaggaatcgttacaggagaaagtgagaacattaggg
agtaaaatggcagaacttttgattttacctgtttatgcgaatctaccgagcgacatgcag
ataaaaatatttcaaccgactccacctggcgcgagaaaagttgtattggccactaatatc
gcggagacttcattgactatagataatatagtatacgtcatagatcctggttatgcgaag
cagaactacttcaatccacgcactgggatggaaagtttgatagtcgtgccgattagcaaa
gcatccgcgaatcagagagcgggacgcgcgggaagagtagcacctggaaagtgctttcgt
ttgtacacggcttgggcttatcagcatgagcttgaagataataccatacctgaaattcaa
cgaattaatttgggtaatgcagtgcttaccttaaaagctctcggaatcgatgatttgatg
cattttgatttcttggatcctccgccgcccgagacattgatcttggcaatggaacagtta
tatgccttaggtgcgctcaatcatcgtggggagctaacgaaacttggtcgtagaatggcc
gagtttccactggatccaatgatggctaaaatgctattagccagcgagaagtatcgctgc
tcagaagaggtggctaccattgcggccatgctttcggtgaacggcgctatcttttatagg
ccaaaagataaaattatacacgcggatgctgcgcgcaagaatttccacgtacctgggggt
gatcatcttactcttcttaatgtgtataatcaatgggcacaaagtgactttagtacacat
tggtgttacgaaaattttatacaacacagatccatgaaacgagcgagggatgttagagaa
cagctggtaggtttgatgcagcgtgtggagatggaactagtctcgggaattacagagaca
gtcaatattagaaaggctattacagctggttatttttatcatgttgcacgtttgtcgaaa
ggaggttcttacaaaactgcaaagcataatcaacaagtcgcaatacatccaactagttcc
ctggttcaggagattccgcggtggcttttgtatcatgaacttgttcttactaccaaagaa
tatatgcgtcaggttacagagattgaaagcaaatggttgctcgaagtggcacctcattat
tacaagcccaaggaaatagaagactcaacaaataaaaagatgccgaaagttgcgggtaga
tcacgaccagatggaacaaattaa
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