Monomorium pharaonis (pharaoh ant): 105838375
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Entry
105838375 CDS
T05760
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105838375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpha03021
]
105838375
Enzymes [BR:
mpha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105838375
Transcription machinery [BR:
mpha03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105838375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
105838375
NCBI-ProteinID:
XP_036139792
LinkDB
All DBs
Position
1:34992470..35013660
Genome browser
AA seq
1691 aa
AA seq
DB search
MNKYHKPRLTPKHQDSQHLVFSVFTANDIRNLSVTKIRTPLCFNILGHPLKGGLYDPALG
TTRSSSEVCNTCGYNGSKCPGHFGHIELPVPVVNPLFHKPLSMLLKLSCLSCFTLQVPSY
IKQLLSAKLKLLYQGQLSDLDNLDQEVTTIISSSQKEEERTECIRDVINTYMQNFFNRTR
YSQTEPQDHENRVNIKNIIMQWHVYVESVLKQYVRNNKGGICVNCHDSLPKILTLQNKIM
ISNKGVGFSKEAHEVTHKLGTVMIMPDQSKEYLRRLWENERDFLEIIVPCLELIDIEYPT
DVFFFEVIPVLPPIVRPVNILNSQIVEHPQTHIYKSIIQDCLVLKNIIQTIQDGGTDHLP
QEGRLVFEQIKGITPVEKLHNAWQALQSNVNHLMDRDMNKTPESINGQGLKQILEKKEGI
IRMHMMGKRVNFAARSVITPDPDLNIDEIGIPEAFARKLTYPTAITPWNVVELRRLVLNG
PDVHPGAVMVENEDGSIQAINSRDSTQREAIAKRLLMTSDRTNESFIGVKVVHRHLQNGD
VLLINRQPTLHKPSIMAHKARVLKGEKTLHLHYANCKAYNADFDGDELNAHFPQNELARS
ESYNIANVSNQYLVPKDGTPLSGLIQDYMVSGVRLTTRGRFFSKTHYAQLVYIALMQDNI
ILLPPAIVKPKMLWSGKQVLSTVIINIIPSNKARINLISNTKIGAKEWQTEEPRRWKCGM
EFKNPITMSEAEVIIRHGELLCGVLDKMHYGATPYGLIHCIYELYGGVCASRMLSAFGRL
FQMFLQCDGFTLGVEDILITRKIDEKRKEIISNCRKVGEAVQRSIVKVPDNASMEEVRAK
IEESYWSNSKFRAQIDHKYKSTLDVYTNDINKVCLSTGLLKKFPDNNLQLMVQSGAKGST
VNTMQISCLLGQSELEGKRPPLMISGKSLSSFPAYDPTPRAGGFIDGRFMTGIRPQECFF
HCMAGREGLIDTAVKTSRSGYLQRCLVKHLEGLSVNYDATVRDYDGSLIQFYYGEDGLDI
SGSRFLKKEQIEFLVDNKDAIIDTKLLECLKTDNGEITKMTKKIKKWESKNGSSLRKRRI
SEFSKFSIENSEQSNNAKRKSIDSHSGRSKAALSLMKKWIKSKKEIKESYRVQCTKCPDP
VMSKYRQDIEFGVLSERIEGLINDYLSRSSKIKKSIFRDLLSIKVMKTICPPGEPVGLLA
AQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMMASRNIKTPSMEIPFQSNLPNL
EKQAKRLRLKLKKCVLSDVLKDITINRRMEENPRRRLMHTMTIEFLSHKYYKEEFSVRPR
DVIKCTEEIFFKNIFREIKKFAKVSKVLLHFEGEKRRTNADEDAAIDQIDPDEMVPESTG
NRTRMDLGEMHESSDEEQAAEDADATMIKSLLRHRENQEYEDPEEEEIAENIVNDEEEAD
DDNNVDKIFKNEDDDDDDDTKKLNNRKSNKLDNKKDWVLSMYAYATDYDYDEGKLLWCKF
TFWLPLKTIGLDLPTIIKNAAGKSVVWETPCIKKAFTFQNSRNETILKTDGLNIMEMFKY
VNILDLNRLYSNDIYNISQTYGIEAANRVIMREVRDVFKMYGITIDCRHLSLIADYMTFD
GTFKPLSRKGMENSASPLQQISFESSLGFLKTATLQGKKDDILSPSSRLMIGQPCKSGTG
AFSLLPSLYNM
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgaataagtaccataagccacgtttaacaccaaaacatcaagattcccaacatttagta
ttttcagtcttcacggcaaacgatataaggaatttaagtgtaacaaaaatcagaacacca
ttatgttttaacattcttggacatccactaaagggtggattatatgacccagccttaggt
acaacgagaagcagttcggaggtatgcaacacatgtggatataacggttccaaatgtcca
ggtcactttggtcatatagaattgccagtacccgttgttaatccattattccacaaacca
ctgtccatgctactcaaactgtcatgtctaagttgctttacattacaagtaccgtcgtac
atcaaacaattactatctgcaaaattaaagttactttatcaaggacaactcagtgatctt
gataatctggatcaagaagtaacgaccataatatcgtcaagtcaaaaagaagaagaacga
acggagtgcattcgcgatgtaattaatacctatatgcagaacttcttcaacagaaccaga
tacagtcaaaccgagcctcaggatcacgagaatcgagtcaatataaaaaacatcattatg
caatggcatgtgtatgtcgaaagtgtactcaaacaatatgtgagaaacaacaaaggtgga
atatgcgtgaattgtcacgacagtctaccgaagattttgacactgcagaataagataatg
ataagcaacaaaggagttggattctccaaagaggcgcacgaggtaacacacaaattggga
acagtgatgatcatgccagatcagtctaaagaatatctacgacgattgtgggaaaatgaa
agagatttcctcgaaataatagtgccttgcttagaactgatagacattgagtatcccact
gacgtgttctttttcgaagtgatacctgtgctaccgccgattgtgcggccggtgaatatt
ctcaatagtcaaatagtcgaacatcctcagactcatatctacaagagtatcatacaggat
tgcttggtcttgaaaaatatcatacaaacgatccaggatggaggcaccgatcatttgcct
caggaaggtcgactcgtgttcgaacaaataaagggaatcacgccggtcgagaagttgcac
aatgcctggcaggcgctgcagagcaacgtgaatcacctgatggatcgcgacatgaataag
actcccgagtccatcaatggtcagggcctgaaacagattctcgagaagaaggagggtatc
attaggatgcatatgatgggtaagagagtgaattttgccgcgcgctcggtgatcactccc
gatcccgacctgaatatcgacgagatcggcattccagaagcttttgctcgtaaactgaca
tatcccacggccataacaccgtggaacgttgtcgaattgagacgattagtcttaaacggt
cccgacgttcatcctggtgcggttatggtagagaacgaggacggttcgatacaagctatc
aatagtcgcgattcaacgcagagagaagccattgcgaaacgccttttgatgacaagcgac
agaaccaacgaatctttcatcggtgtcaaagtggttcatcggcatctccaaaatggcgat
gtgctgctgataaacagacaaccgacgttgcacaagccgagtataatggctcacaaggca
cgcgttctaaagggcgagaagacactgcatcttcattatgcgaactgtaaagcatacaac
gcggacttcgatggtgacgagctcaacgctcactttccgcaaaacgagctagccagaagt
gaaagttacaacatagccaatgtatccaatcagtatctcgtgccaaaagacggaactcca
ttgagcggccttatacaggattacatggtatctggggtgcgattgacaactagaggtaga
ttcttttcgaagacgcactacgcgcaattggtttacatcgcattgatgcaagataatata
attcttctaccgccggctatcgttaaaccgaagatgctgtggtcgggtaaacaagtcctc
tcgacagtcataataaatatcattccctcaaataaagcgcgaattaacttaatctccaac
acgaagattggcgcaaaggaatggcaaacagaggaaccgcgacgttggaaatgcggaatg
gaatttaaaaatccaataaccatgtcggaggctgaagttataattcgacatggagaatta
ctgtgcggagtactcgacaaaatgcactatggtgcgacaccttatggtctcattcattgt
atttacgagttgtatggaggagtatgtgcgagtaggatgcttagcgcgttcggcaggctg
ttccagatgtttctacagtgtgacggattcactctcggcgtcgaagacattctgataact
cgtaagattgacgagaaacgcaaagagatcatttcaaactgtagaaaagttggggaagct
gtacaaagatccatagtaaaagtacccgataacgcgtctatggaggaagttcgtgctaag
atagaggaatcttactggagtaactcgaaatttcgcgcacaaattgatcacaaatataag
agcaccttggacgtatataccaacgacattaacaaagtctgtctatcaacaggtcttctc
aagaaattcccggacaacaatttgcaactcatggtgcaatctggcgcgaagggttctaca
gtgaacaccatgcagatatcatgtttgctcggtcagagcgaattggaaggcaaaagaccg
ccgctgatgatcagcggaaagagtctttcgagttttccggcttatgatccgacacctaga
gccggtggtttcattgacggtagatttatgaccggcatcagaccccaagagtgctttttc
cattgtatggcaggacgcgagggtctcattgacaccgctgtgaaaaccagcaggtccggt
tacctgcagaggtgtctggtgaaacacctggaaggtttaagtgtcaattacgacgcgaca
gtcagagactacgacggcagtcttattcagttttattatggagaggacggcctcgatata
tctggttcgcgttttctgaaaaaggaacaaattgaatttctagttgataataaagacgct
attatagacacgaagttattagagtgcctgaaaacagataatggagagattacgaaaatg
acgaaaaagattaagaaatgggaaagcaaaaatggttcctccttgcgaaagaggagaatc
agcgagttcagtaaattttccatagaaaattctgaacagagtaataatgcgaaacgaaaa
agtattgatagccatagtgggagaagtaaagccgcgttatcgctcatgaagaagtggata
aaatcaaaaaaagaaataaaggaatcatatcgcgtgcaatgtaccaaatgtcctgatcca
gtaatgtctaagtacagacaagacatagaattcggtgtattgtccgaacggattgaaggc
ttaataaatgactatctctcgcgctcgtcgaaaattaagaaatctatcttcagagatcta
ttatctataaaagttatgaagacaatttgtccacctggtgagccagtcggtctattagcc
gcgcaatccataggtgaaccatccactcaaatgaccttgaatactttccatttcgcggga
cgtggagagatgaacgtaaccttgggtattccaagattacgtgaaatcctgatgatggcg
tcgagaaacataaaaactccgagtatggagattcccttccaaagtaatttaccaaatctc
gagaagcaagcaaaaaggttgagattaaaattgaaaaaatgcgttttaagcgacgtgttg
aaggacatcacgataaacagaagaatggaagagaatccgcggagaagattgatgcatact
atgacaatcgaatttctttctcacaaatattacaaggaagaattttccgttcgtccgcgg
gacgtgattaaatgcactgaggaaatttttttcaaaaatatatttagggagattaagaag
ttcgccaaggtatcgaaagttctattgcattttgaaggggaaaaaagacggacgaatgcg
gatgaggacgcggcaatagatcagattgatcctgacgagatggtgccagagagcactgga
aatagaacgcggatggacttaggagagatgcacgagtcgtctgatgaagaacaggccgcg
gaagacgctgacgcaacgatgataaaatcattgctgcgtcatcgagagaatcaggaatat
gaagatcctgaagaggaagaaattgcagagaatattgtaaatgatgaggaagaagcggac
gatgataataatgtagataaaatttttaaaaatgaggacgatgacgacgatgacgatact
aagaagttgaataatagaaaaagtaacaaacttgataacaaaaaggactgggtcttaagt
atgtatgcttatgctacggattatgattatgacgagggtaaattgttatggtgcaaattt
accttttggttaccactcaaaacgattggattggatttaccgacaataatcaagaatgct
gctggcaaatctgttgtatgggaaacaccatgcatcaagaaagcctttacatttcaaaac
agtagaaatgaaacaattctcaaaacagatggtttaaatataatggaaatgtttaaatat
gttaatattcttgatttaaacagattatattctaatgatatttacaatatttctcaaacg
tacggaattgaagccgcaaatagagttattatgagagaagtcagagacgtttttaagatg
tacggcatcaccattgattgtagacatctatccttaatcgcagattatatgaccttcgat
ggtacgtttaaaccactcagtcgaaaaggaatggagaattctgcctctccattgcagcaa
ataagtttcgaaagttcgctaggtttcttgaaaacggcgacgttacaaggaaaaaaagat
gatatattatcaccttcgagcagactgatgataggacaaccatgcaaatctggaactggg
gcattttctcttttaccatcattgtataatatgtaa
DBGET
integrated database retrieval system
