Monomorium pharaonis (pharaoh ant): 105838425
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Entry
105838425 CDS
T05760
Name
(RefSeq) WD40 repeat-containing protein SMU1
KO
K13111
WD40 repeat-containing protein SMU1
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mpha03041
]
105838425
Spliceosome [BR:
mpha03041
]
Complex B
Other components
Complex B specific factors
105838425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
EIF3I
WD40_Gbeta
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
LisH_TPL
NBCH_WD40
Beta-prop_ACSF4
Beta-prop_VPS8
Beta-prop_TEP1_C
Beta-prop_Nup120_160
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_Vps41
Ge1_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_IP5PC_F
VPS8_N
PROPPIN
WD40_like
WD_LRWD1
DUF7165
LisH_WDR26
LisH_PAC1
zf_topless
Motif
Other DBs
NCBI-GeneID:
105838425
NCBI-ProteinID:
XP_012539431
LinkDB
All DBs
Position
7:8841725..8845394
Genome browser
AA seq
510 aa
AA seq
DB search
MSIEIESADVIRLIQQYLKEANLVKTLQTLQEETGVSLNTVDSVDGFVADINNGHWDTVL
KAIQSLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTDPMIMMKQQEPERYIHLENL
LARSYFDPREAYPDGSTKEKRRAYIATALAGEVSVVPSSRLLALLGQALKWQQHQGLLPP
GTTIDLFRGKAAVRDQEDEKYPTQLSKQIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMEQAVLSMSFSRDSEMLAGGGQDGKIKVWRVQSGQCLR
RFEKAHSKGVTCLQFSRDNSQILSTSFDTTIRIHGLKSGKTLKEFRGHTSFVNEVVFSAD
GHNIISASSDGTVKIWSLKTTECIGTYKSLGAADLTVNSIHLLPRNPEHFVVCNRSNTVV
IMNMQGQIVRSFSSGKREGGDFVTTVVSPRGEFIYCVGEDLVLYCFSTSSGKLERTLNIH
EKDVIGLAHHPHQNLLCSYSEDGLLKLWKP
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcgaaattgaatccgccgacgtgatccgattgatacagcagtatctcaaggag
gcgaacctcgtgaagacactgcagactttacaggaagaaactggggtatcgctgaatact
gtggacagtgtggatggatttgtggcagatataaataatggccattgggataccgttctg
aaagctatacagtcattaaagctacctgataagaaacttatagacttgtatgaacaggtt
gttttagaattaattgagctacgagaattaggtgctgcacgttccttattgagacagact
gatcccatgatcatgatgaagcaacaggaaccagagagatacattcacttagagaatcta
cttgcacgttcatattttgatccacgtgaggcgtatcctgacggaagcacaaaggagaaa
cgaagagcgtacatagccactgccctcgccggcgaagtatcggtagtaccatccagtaga
ttgcttgctctattgggacaggcgctgaagtggcagcagcatcagggtctactacctccc
ggcaccacgatagatctgttccgaggaaaagcggcagttcgcgatcaggaggacgagaag
tacccgacgcaactatcgaaacaaatcaagtttggtcagaaatcacacgtggagtgcgcg
cgtttctcgcccgatggccaatacctagtgaccggttcagtggacggttttatcgaagtg
tggaacttcacaaccggtaaaatcagaaaggacttaaaataccaggcgcaagacaatttt
atgatgatggagcaggcggttctgtcgatgtcgttcagtcgtgacagtgagatgctggca
ggtggcggtcaagatggtaaaattaaggtctggagggtacagagtggacagtgcttgagg
agattcgagaaggcgcactcgaagggtgtgacttgcttacagtttagcagagataacagt
caaatattgtcgacttcgttcgatactactataagaatacacggccttaagtctgggaaa
acactcaaggaattccgcggtcacacctcgtttgtcaatgaagtcgttttctctgcggat
ggtcacaatataattagcgcatcatcggacggaacagtgaaaatttggagtttgaaaacc
accgaatgcataggcacttacaaatcgttaggagctgctgatctcacggtgaacagcata
catcttcttcctcgaaacccggagcactttgtcgtgtgcaatcgttctaacactgtagtg
attatgaatatgcaaggacaaatagtaagatcgttttccagtggtaaacgagagggaggt
gacttcgtgactacagttgtgagtccgcgtggcgaatttatctactgcgtcggtgaggat
ctcgtgctctactgtttctccacgtcgtcgggaaagctcgagaggacattgaatatacac
gagaaggatgtcatcggtttggcacatcatccccatcaaaatttgttatgttcttatagt
gaggatggtttgttgaaactgtggaagccgtaa
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