Monomorium pharaonis (pharaoh ant): 105838936
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Entry
105838936 CDS
T05760
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13191
RNA-binding protein 16
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpha03021
]
105838936
03041 Spliceosome [BR:
mpha03041
]
105838936
Transcription machinery [BR:
mpha03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105838936
Spliceosome [BR:
mpha03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105838936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
105838936
NCBI-ProteinID:
XP_012540329
LinkDB
All DBs
Position
11:complement(1359570..1371351)
Genome browser
AA seq
1606 aa
AA seq
DB search
MEAVKAFNAELSALYDVKPPISKAKMNSLTRGAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGMEKDVFAPRFAKNMQTTFLNLLKCPQEDKSKVIRVLNLWQKN
AVFPPEVIQPLFDLADPNHPIHKEQPVNSNGTLNTSSGNNLSNVSAVTKTPPSAIKNAVK
DSKLFPSGKTIDPVWLAQTKMEAAVNANKLLNQSNVGQMDSNIFDQLQHLQQLLMKKDVT
NEQKSSVKFDKKLLDFDYGEEEDDDVVVTNSPNTAASTNTQHNAVSANSLESLGLLLANP
EVLRQLQTLQQTMQSNASSSQLEMEEKMRKLQQMKQQEEEFDKHLAQTVPNLPFASECEL
KPSDILKPSAQNYASNMNSNVMQDMSQPPPGYPPAMSYTSQSLSNIRQMNQSVHQNQKSP
LLDERQETQDYSGNSIRRDSSSVEIVNCENTSSHSRSPERYRHHSRSRSPRHRDRDRDRD
RDRKSRSRSRSRRRRSRSRDRGRDRKRDDSREKMTEEEREKDRERRKRGLPPIVRDKLSV
CSTTLWVGHLSKLVHQEELSDTFGELGDIVSIDLISPRGCAFICMNRRQDAYRALTKLKN
QKMQGKAITLAWAPGKGVKGKEWKDYWEVELGVSYIPWNKLTNITDQELELLEEGGMIDE
DTLPPHLKGKLKHTGTSADVLQQQLHLQQQAMVAAANAGAPIPTLTDGIVNVMQSSTNSQ
QQQQQQQQQLVDTSQPPPIRPPTSAALLPPPNTQLQMMPPAFTMPGVPRMISHMGLQMTH
GLMPNVPIGVPPPNMQSLLGPPGMMQTMLTPSVNPPFGAGVGVSLLTQIPLPAPAAPSDK
PNSTGYEILNITGMPHNVPPIGVPPPTTETSMPNLPMLRQPYGVGPPAPPMQMQLPQQHH
SDDMDVEMEDAMPQSLNSNLPGKDKPNLSDQLIAAMNIGSSVNDCRLENDQSREYKERER
DRENRERRDRSDRDRGDRMDINECRIDRGRDRGRGRDRGRDRRRDNRDGRDRERDERRGD
RDSRETRESREGSNRHLEGPSVQNQNVQEGESMTKKESKPSLADRLRQLADGTLPLDDRM
DRNIRNRSERSSERNDRNFEESPGGSGGGRRPPGDMPISLMDLPKFGGVLPPDRTDFPRG
PDFRSGPPDTREFPQRGLPDRPDRQNFPPRGGPRTSQMDDFIDPRMQPGIFPEDYENRLG
HNGPRSDDFPPGRLGPARDEFERPEVRSRRPPVDEYERERFEYEMRRDGFDPRMQDGFDL
RSHNDRSDFDLRRRDFFGGPMEPVFGMPPLMGPKGPRGPGPAGPDGFGPRGARGPGPMMF
HLRGMGPRGMRPGMRPPFAPRGPPFDPREADPFFRPPFDDMRGRPGPHIRPPFGPMGPPA
MHGPDGPWRNQEGSGPASWPGQESDGHGQRENHLPRDKQKLTKHQDFKNMSERENRNRNR
KSRWGNVSPPLTDDVDEMPSEEAENKVEISDGRELEVKDSFDASSLAVDQQNLLMQKEQD
ESAIQEQNVIHGDRENEFAISNDKGKDEINYQNDQGQTDIFDIGADHFSSNDLTLKQRSE
EEPCEYEAPIPAEDSAQQNVVQSIEQIGHASENHSEQSVEQQADSL
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtaaaggcgttcaacgcggagctctctgctctctacgatgtcaaaccccca
atctcgaaagccaagatgaattcgcttacacgaggagctatcaaagcaataaaattctac
aaacatgttgtacaaagtgtggaaaaattcattcaaaaatgcaagccagagtacaaagta
ccagggttgtatgtgatagattcaattgttcgacaatcccgacatcagtttgggatggaa
aaggatgtgtttgctccacgatttgcaaaaaatatgcagactacttttctcaatcttcta
aaatgtccacaagaagataagagcaaagttatacgtgtattgaacctttggcagaagaat
gccgtttttccaccagaagttattcaaccactttttgatctggcagacccaaatcatcca
atacataaagaacagccagtaaatagcaatggtacattaaatacatcatctggaaataat
ctaagtaacgtaagcgcagtgactaagactcctccatccgcaattaaaaatgctgtaaaa
gactctaaactttttccatctggaaaaacaattgatccagtatggctggcacaaacaaaa
atggaagcggcagtcaacgcaaataaacttttgaatcaatccaacgttggtcagatggat
tccaatatttttgaccagttgcaacatttacagcaactacttatgaaaaaagatgttaca
aatgagcaaaagagttccgtcaagtttgataaaaaattgttagattttgattatggtgag
gaagaagatgacgatgtcgttgttactaattctccaaacacagctgcctcgaccaatacc
caacataatgcagtttcagcaaacagtttagaaagccttggactgttgcttgcaaatcca
gaggttctgagacaattacaaactttgcaacaaaccatgcagagtaatgcatcttcttcg
caacttgaaatggaagaaaagatgcgcaagctgcaacaaatgaaacagcaagaagaagaa
ttcgataagcatttagcacaaactgttcctaaccttccttttgcatctgaatgcgaatta
aaaccttctgatattttaaaaccaagtgcacaaaattatgcctcaaatatgaacagcaat
gtgatgcaagatatgagccagccacctcctggttatccgccagctatgtcgtacacttcg
caatctttatcaaatattcgacaaatgaatcagtccgtgcatcagaatcaaaagagtcca
ttacttgatgaacgtcaagagacgcaagattattctggaaatagtatcagacgtgatagt
agcagtgtagaaattgtaaactgcgaaaacacgagttcccacagtagatcgccagaacgg
tatcgacatcacagtcgatcccgatctccacggcacagagacagagacagagatcgagat
agagatagaaaatctcggtctagaagcagatcgagacgaagaagatctcgttcaagggat
aggggtcgtgatagaaaacgtgacgatagtcgagaaaagatgacagaagaagagcgagag
aaagatagggagcgacgcaaacgcggtttgccaccgatagttagagataaattaagtgtt
tgtagtacgacgctttgggtaggacatttgtcgaaactcgtacatcaagaagaattgtct
gatacatttggagagcttggtgatattgttagcattgatttaatctcaccaagaggttgt
gcttttatatgtatgaacaggaggcaggatgcgtatcgagcgttaacgaaattgaaaaat
caaaagatgcaaggcaaagctattacgttagcatgggcacctggcaaaggagtgaagggc
aaggaatggaaagactattgggaagtagaactaggcgtcagttacatcccttggaataag
ttaaccaacattaccgatcaggagttggagttgctggaagaaggagggatgatagatgaa
gacacattacctccccatttgaaaggaaaactgaaacacactggcacgagtgcggatgtt
ctgcagcaacaattgcatctgcaacagcaagcaatggttgccgccgcgaacgctggtgct
ccgattcccactttgacagacggtatcgtcaatgtcatgcagtcgtcgactaattcacag
cagcagcaacaacaacaacagcagcaattagtcgacactagtcagccaccaccaatcaga
ccaccaacgtcggctgcgctgctgcctcctccgaacacgcaattgcaaatgatgccgccg
gcatttacgatgccaggggtgccacgaatgattagccacatgggcctacaaatgacacat
ggattaatgccgaatgttccgattggagtaccaccgcccaatatgcagagtctgctggga
ccacccggcatgatgcaaaccatgttgacaccttcagtaaacccaccatttggtgcaggt
gttggcgtaagtttattgacacaaattccactgcccgcacctgcagcgccttcggataag
ccaaactccaccggatacgagatcctgaatattacaggtatgccgcacaatgttccacca
attggagtaccgccgcctacgactgagacaagcatgccgaacttgccaatgttacgacaa
ccgtacggagtgggaccgccggcgccgccaatgcagatgcaactacctcaacagcaccac
tcggacgacatggacgtggagatggaggacgcgatgccgcaaagtttgaacagcaattta
cccggcaaggacaagccgaaccttagtgatcagttaatcgcggcgatgaatataggcagt
agtgtgaacgattgtcgtctggagaacgatcagtctcgcgagtacaaggagcgggaacgc
gatcgggaaaacagagaaagaagagaccgaagtgatcgagatcgcggcgatcgcatggac
attaacgagtgcagaatagatcgtggcagagacagaggaagaggacgggatcgcggtcga
gatagacgtcgagataatcgcgacggtcgtgatagagaaagagatgagagacgcggagat
cgcgacagccgcgagacccgcgagagccgagaaggtagcaacagacacttggagggaccg
agtgtgcaaaatcaaaacgttcaagaaggcgagagtatgacgaagaaagagagtaagccc
agtctagccgatcgattgcggcaattggcggatggtacgttaccgctggatgatcggatg
gacagaaacattcgtaatcgcagtgagcgcagcagcgagcgaaacgacaggaactttgaa
gaaagtcccggaggcagcggaggaggacgacggccacccggcgacatgccgatctcattg
atggacctacctaagttcggaggagtgttgccgccagatcgaacagatttcccgcgagga
ccagattttcgaagcggaccaccagacacacgcgagtttccgcaacgcggcctgcccgat
cggcctgaccgacagaattttccgccgcgtggtggaccaaggacttcgcagatggacgac
tttatagaccccaggatgcagcctggcatattcccggaagattacgagaacagactaggt
cacaatggacctcgatccgatgattttccaccgggtagactgggaccagcacgagacgag
ttcgagcgaccggaagtgcgttctcgcagaccgcccgtggacgagtatgaacgtgaacgt
ttcgagtacgagatgagacgcgatggatttgatccgcggatgcaggacggcttcgatctt
agaagtcacaacgaccgttcggatttcgacctccgcagaagagatttctttggtggccca
atggaacctgtgttcggaatgccacccttaatggggccgaaaggaccgagaggacctgga
ccggctggacccgatggatttggaccgcgtggagccaggggacctggtccaatgatgttc
catctacgtggcatgggtccgagaggtatgaggcccgggatgaggccgccgttcgcacct
cgtggtccaccatttgatcccagagaagcggaccctttcttccgaccgccgttcgatgat
atgcgcggtcgtccaggaccacacatccggccaccgtttggcccaatgggcccgccggcg
atgcatggaccggacggaccgtggagaaatcaagagggtagtgggcccgcgtcctggccc
ggtcaggaatccgatggacacggccaacgtgagaatcatcttccgcgagacaagcaaaaa
ctaacgaaacatcaggactttaaaaacatgtccgagcgggagaatcgaaaccgaaaccga
aaatccaggtggggtaatgttagtccaccgctgacggacgatgtagatgagatgccatca
gaagaggccgaaaataaggtggagatatcagatggcagagagctagaagtgaaggatagc
tttgatgcctcatcgttggctgttgatcaacagaatcttctaatgcaaaaggaacaagac
gagtcagcaattcaggagcagaatgtgatacacggtgacagagaaaatgaatttgctata
tcgaatgataagggtaaagatgaaattaactatcaaaatgaccaggggcagactgatatc
tttgatattggtgcggatcatttttccagcaacgatttaacgctaaaacaacggagtgaa
gaagaaccgtgtgaatatgaagcgcccattccagctgaagattcagcgcaacaaaatgtg
gtacaatctatcgaacaaatagggcacgccagtgagaatcatagtgaacaatcagtggaa
cagcaagcggattcgttgtaa
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integrated database retrieval system
