Monomorium pharaonis (pharaoh ant): 105839220
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Entry
105839220 CDS
T05760
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpha03000
]
105839220
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105839220
03041 Spliceosome [BR:
mpha03041
]
105839220
Transcription factors [BR:
mpha03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
105839220
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
105839220
mRNA cycle factors
Common to processing body (P body) and stress granule
105839220
Spliceosome [BR:
mpha03041
]
Common components
Common spliceosomal components
General mRNP proteins
105839220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
Motif
Other DBs
NCBI-GeneID:
105839220
NCBI-ProteinID:
XP_012540835
LinkDB
All DBs
Position
9:complement(19540466..19553803)
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AA seq
282 aa
AA seq
DB search
MGETEKQPEQPKAVQQKMVIANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNN
PRKAVRSVGDGEVVEFDVVIGEKGHEAANVTGPAGEAVKGSPYAADKRRGYRGVHWVYPR
RGNGRPQNRRSREGQEGYDQGEGKPGDDANAEGGGQAQQQQRRYRLRRHYDGYYRGGRRS
GPTSQQGDNAGEGGEQAEGTGGEGGAPPRGGGRGRGGPSRRYFRRNFRGGRGGGPPRRPR
SQDGQVRSEQKSDAPKDSDAPAAAPAPQESQPVQNTTTESTA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagacggaaaagcagcccgaacaacccaaggctgtccagcagaagatggtcatc
gctaacaaagtgaccggaactgtgaaatggttcaatgtcaagagtggctacggtttcatt
aatagaaacgatactaaggaagatgtgttcgtccatcaatcggctatcgttaagaacaac
ccgagaaaggccgtacgtagcgtgggtgatggcgaggtcgttgagttcgacgtcgttatt
ggtgagaaaggtcacgaggccgccaatgtcacgggtccagcgggcgaagcggtaaaaggc
tcgccctatgctgcagacaaacgtcgcggatatcgcggtgtccactgggtgtatccgaga
cgtggcaatggtcgaccgcagaatcgtagatcacgcgaaggccaggagggttacgatcaa
ggcgaaggaaagcccggcgatgacgcaaacgccgaaggaggcggccaggcacagcagcaa
cagcgtcgctacaggctgcgtcgccattatgatggatactaccgcggaggacgacgttcc
gggcccacatcgcagcagggagataatgctggcgaaggtggtgagcaagcggaaggaacc
ggcggcgagggtggcgcaccgccgcgcggtggtggtcgtggacgcggtggcccatcacga
cgttacttccgccgcaatttccgcggaggaagaggtggtggtccgccacgacgtcctcgc
agccaggatggccaggtaaggtcggagcagaagtctgatgcacctaaagattcggatgca
cctgccgctgcccctgctccacaggagagccaaccggtgcagaacaccaccaccgaaagc
accgcctaa
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