Monomorium pharaonis (pharaoh ant): 105839228
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Entry
105839228 CDS
T05760
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpha03021
]
105839228
03036 Chromosome and associated proteins [BR:
mpha03036
]
105839228
Transcription machinery [BR:
mpha03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105839228
Chromosome and associated proteins [BR:
mpha03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
105839228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
Tex_central_region
HHH_9
HHH_3
SH2
Tex_YqgF
Spt6_S1
HTH_10
Tex_N
Motif
Other DBs
NCBI-GeneID:
105839228
NCBI-ProteinID:
XP_012540851
LinkDB
All DBs
Position
Unknown
AA seq
1769 aa
AA seq
DB search
MAEYLDSEADVSEGEEELDQNEKKKLRKLKAVEESDDEEEDDEDQLREELKDLIDDNPIE
ESEGEDSDGSDHHKKRKKSDDEDFDDRLEDEDYDLIEENLGVKLDRKRFKRLRRIQDEES
EEEQEKEADEERDAIANELFEGSGDERDIITEDERRSERSHRPEPETFEEGSDEGEYTDA
DDFIVDDDGRPIAEKRKKKKPIFSDAALQEAQDIFGVDFDYDEFGKYGEEDYEEEEEEEE
EDEYMDEDVDTERPRRPKKQLKKKTTRKSIFEIYEPSELKRGHFTDMDNEIRNTDIPERM
QLRSVPVTPVPEGSDELDLEAEWIYKQAFCKPTISIQDAHLNAEAKERARKGPQTIGKIK
KALDFMRNQHFEVPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLRQRKENLLKLFEKM
RNYQLEDIMKNPDAPLPDNVRVIKDDDIERLKNVQTSEELNDVYNHFMLYYSHEIPAMQE
AARQKERQARREERIQRRKQQIAEAEENGEDPPEEEEMPEEEEIDETLKQAVRSGPYSIC
RKAGLDGLAKKFGLTPEHYAENLRDNYQRHEVDQEPTEPTTIAAEYCSSRFKTTEEVLKA
AQLMVAIQLAREPLVRKCVREMYMERAKISIKPTKKGIKEIDENHPIYTMKYLKDKPVRD
LVGVQFLNLMIAEEDKLITITLSDSIEGNTSSNYVDEMKQLYCRDEFSKLVQDWNALRVG
SVEIALNRMVIPHLKKELRTNLIAEAKECVMRACCRKMYNWIKVAPYSCEFPEEEDEEWD
TSKGLRVMGLAYVPDYSQAAFTCLVAADGECTDYLRLPHLMKRKNSYREDEKTMKEADLL
ALRNFIATKKPHVVVVAGESREAMMIAADIKECITHLSEEEQFPNIQVEICENELAKIYS
NSNKGISEFRDYPELLRQAISLARRMQDPLVEFSQLCTADEEILCLKYHNLQDQLPKEEL
LENLYLEFVNRVNEVGVDVNKAVQQAYCGNLVQFVCGLGPRKGQALIKMLKQTNQRLENR
TQLVTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDAL
EYDDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNSRYKD
LRVPYQSQSAEKLFDILTKETPETFYVGKLVLATVVGISHRKPQGDQLDQANPVRNEETG
LWQCPFCLKNDFPELSEVWNHFDAGSCPGKATGVRLRLDNGISGYIHIKNLSDRHVANPC
ERVGMGQIIHCRIIKIEVDRFSVECTSKSSDLADKNHEWRPQRDPFYDTEAEQRDIKVEE
DAKKAKQRQIYVKRVIVHPSFHNISFAETVKLMQTMKQGEAIVRPSSKGADHLTVTWKVT
DDILQHIDVREEGKENAFSLGQSLWIGNEEFEDLDEIIARHVNPMAAYASELLDFKYYKP
TVEGIKDKAEDILKEQKKENPGGIPYIISAAKTYPGKFLLSYLPRTRCRHEYVTVTSEGF
RFRAQMFGRVSDLLRWFKEHFRDPVPGQATPSTPRGAMTSRTPYTTTPGTVSGMNQEAIQ
RVAQNLPHHMLHSLSQVANQTPHHYPPHTPGAASATGYGGVHTYPNTPYTPSGQTPFMTP
YQTPHHTPHHGQPTPRYGQQTPSHHQGPFVHPPPPSMTPGHHRSVQSHRPTPPLSTPSGD
PTDWKKAAEAWARLKTGPRVSGSTPRYDESRKTPRNYDEPAGRTTPSGRSRPSSTRTPSY
KSPRGTPHTNSSPRSMSLSGDGTPLYDES
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatctcgactccgaggccgacgtgagcgagggtgaagaggagttggaccag
aacgagaagaaaaagctgaggaaactcaaggcggtggaggagagcgacgacgaggaggaa
gacgatgaggatcaattgcgtgaggaactgaaagatttgatagatgacaatcctatagag
gagagcgagggtgaagacagtgacggttctgatcatcacaagaaacgtaagaagagtgat
gatgaggattttgacgatcgcttggaagatgaagattatgatttgattgaagaaaattta
ggtgttaagcttgatagaaaacgttttaaacgtcttcgaagaattcaagatgaggagtca
gaggaggaacaagaaaaagaagcggacgaagagagggatgccattgccaacgaattgttt
gaaggttccggagatgaaagggatattattacggaggacgaaagacggagtgaacgaagt
cataggccggagccggaaacatttgaggaaggtagtgacgaaggagaatacactgatgcg
gatgattttattgttgacgatgatggtagacctatcgcggagaaaagaaagaagaagaag
ccaatattttccgatgcggcgctgcaagaagcacaggacatttttggtgttgatttcgat
tatgacgagtttggcaaatatggtgaggaagattatgaggaagaggaggaggaagaagag
gaagatgaatacatggacgaagatgttgatactgaacgaccacgacgaccaaagaagcag
ctgaagaaaaagactacaagaaagagtatctttgagatttacgagcccagtgaattgaaa
cgcggtcacttcaccgatatggataacgagatacgtaatacggatataccagaaagaatg
caacttcggtccgtgccggtcaccccagttccagaaggttctgatgaactggacctcgaa
gcagaatggatctacaaacaggcattttgcaaacctacaatatctattcaggatgcccac
ttgaatgctgaggctaaggaacgagcacgaaaaggaccacagaccatcggcaagatcaag
aaagccttagacttcatgcgtaatcaacactttgaagtcccttttatatctttctatagg
aaggagtacgtactgcccgagctaaacattaatgatctatggaaggtttacaagtttgat
gcgaaatggtgtcaactgcgccagcggaaagagaacctgctcaagctgttcgagaagatg
cgtaactatcaactggaggacatcatgaaaaatccagacgcgccgttgccggataatgtg
cgggtgattaaggacgacgacattgagcgactgaagaacgtgcagacaagtgaagaactt
aacgacgtctacaatcacttcatgctgtattacagtcacgagatcccagcaatgcaggaa
gccgcgcgacagaaggagaggcaggcacgacgcgaagaaaggatccaacgacgtaaacag
caaattgccgaagcggaagaaaacggagaggatccgccagaggaggaagagatgccggag
gaggaagaaatcgatgagacgctgaagcaagctgttagaagcggtccatactcgatctgt
cggaaggctggtctggacggtctggcgaagaagtttggtctaacaccagaacactatgcc
gagaatcttcgcgataattatcagcgtcacgaggtggatcaagagccgaccgagccgacg
acaattgctgccgaatactgtagttcacgatttaagaccactgaagaagtgctgaaagcc
gctcagctgatggtggcgattcagttggcgcgcgagccactcgtgcgcaagtgcgtgcgc
gagatgtacatggaacgcgctaagatatctataaaaccgacaaagaaaggcatcaaggag
atcgacgaaaaccatccgatctacacaatgaaatacttgaaggacaagccagtgcgcgat
cttgtaggcgttcagttcttgaatctgatgatcgccgaggaggacaaactcatcacaatc
acccttagtgactccattgagggtaacaccagtagcaactacgtcgatgaaatgaagcag
ctctattgtcgggacgagttcagtaaactcgtgcaagattggaacgccctgcgcgtaggt
agcgtcgagatcgcgctcaaccgcatggtgataccgcatctgaagaaggagctgcgcaca
aatcttatcgccgaagcgaaagaatgcgtaatgcgcgcctgctgccgcaagatgtacaac
tggatcaaggtcgcaccatacagctgcgagtttcccgaggaggaggatgaagaatgggac
accagcaaaggtctgcgcgtcatgggcctggcctacgtacccgactattcgcaggcggct
ttcacttgtctagtcgcggccgatggcgagtgtaccgattatctgcgcttgccgcatctg
atgaagcgtaagaacagctaccgcgaagacgagaagacgatgaaggaggccgatctattg
gctctgagaaacttcatagctacaaagaagccgcatgtggtcgtggtggccggcgagtct
cgggaggcgatgatgattgccgccgacatcaaggagtgtatcactcatctgtcggaagag
gagcagtttcccaatatccaagtggaaatatgcgaaaacgaacttgccaaaatctattcc
aatagtaacaagggtatctcggaattccgggattatccagaattattacgtcaggctatc
tcattggcaagaaggatgcaggatccactggtggagttctcacagttgtgcacggctgat
gaggagattctctgcctcaagtatcacaatttgcaggatcagttgcctaaggaagagctg
ttggaaaatctgtatctggagttcgtcaatcgcgtgaacgaggttggcgtagatgtgaat
aaggcggtacaacaggcatactgtggcaaccttgttcaatttgtttgcggtctcggcccg
cgaaagggccaggcattgattaagatgctgaagcaaactaatcagcggttggagaacagg
acacaattagttaccgcatgccacatggggccaaaggtatttattaattgcgctggcttt
ataaaaatcgacaccaatagtttgggcgatagtaccgaggcatacgtggaggtgctcgac
ggttcccgcgtacatccggagacttatgagtgggccaggaagatggcagttgacgctcta
gagtacgacgacgaggatgccaatcctgccggcgctttggaggagatactcgagtcgccg
gagcgccttaaggatctagatctcgatgctttcgcagaagaactcgagcggcaaggcttc
ggtaacaaatgcgtcactctctacgacattagagccgaattgaacagtcggtacaaggat
cttcgagtgccatatcaatcgcagagcgctgaaaaactgttcgatattctgacgaaagag
acacctgaaaccttctacgtcggcaaactagtgctggctaccgtagttggcatcagtcat
cgaaagccacagggcgatcaacttgatcaggcgaatcctgtgcgaaacgaagagaccggt
ctgtggcagtgtccgttttgtttgaagaacgattttcccgaactgtcggaggtgtggaat
cactttgacgctgggtcttgtccgggaaaagccacaggcgtaagattgcgtctggacaat
ggcatctccggttatatccacatcaagaatctatcggaccggcatgttgcgaatccctgc
gagagagtcggaatgggacagattattcattgccggattattaaaatcgaggtagatcga
ttcagcgtcgaatgtaccagcaagagcagcgatcttgctgacaaaaatcacgaatggagg
ccacaaagggatccattttatgacaccgaggccgaacaaagggacataaaggtggaagaa
gatgcgaagaaggcgaaacagcggcaaatctacgtaaaacgtgtgattgttcatccgtcc
ttccacaatatcagtttcgccgagactgtgaaattaatgcaaacaatgaagcaaggcgaa
gcgatagtgagaccaagcagcaaaggcgctgatcacctaacagtcacatggaaagtcact
gatgatattctgcagcacatcgacgttcgcgaggaaggcaaagagaacgctttttcatta
gggcaaagtctgtggatcggcaacgaggagttcgaggatttggacgagattatcgctcga
catgtaaatcccatggccgcttatgcttctgaattactggatttcaagtactacaagcct
accgtagaaggaatcaaagacaaagccgaagacatactgaaagaacagaagaaggaaaat
cctggtggaattccttatatcatatcagcagctaagacttatcctggaaagtttctactc
tcatatttgccgcgcactcgttgccgccacgaatatgtcacagtgacatccgagggcttt
agatttcgggcacagatgttcggtagggtgagcgacctattacgctggttcaaagaacac
tttagggatcctgtccctggacaagctactcctagtacaccacgcggtgcgatgacgtct
agaacaccttataccactacgccgggaacagtcagcggaatgaatcaagaagcaatacag
cgagttgcacaaaatcttccacatcatatgctacattcattgtcgcaagtggcgaatcaa
acgccacatcactatccgccacacacgccgggagcggctagcgctaccggttatggcgga
gtgcacacgtatcccaatacaccgtatacgccatctggtcaaactccttttatgactcca
taccagacacctcatcacacaccgcatcacggccagcccactcccagatacggccaacaa
actcccagccatcatcaagggcccttcgtgcatccaccgccgccttcaatgacacccggc
catcaccgatctgttcaatcgcacagacctacaccacccctgtccactccttctggtgat
ccgacggattggaaaaaggctgccgaagcgtgggcacgtttaaaaactggtcctcgagtc
tctggatcaacgcctagatacgacgagtctagaaaaactccgcgtaactatgacgagcca
gccggaagaacgacgccctccggaaggagcagaccctcctctacgcgtactccatcgtat
aaatctccgcggggcactccacatacaaattctagtccacggagtatgtctctcagcgga
gatggtactcctctatacgatgagagctaa
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integrated database retrieval system
