Monomorium pharaonis (pharaoh ant): 105839277
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Entry
105839277 CDS
T05760
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105839277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mpha03041
]
105839277
Spliceosome [BR:
mpha03041
]
Complex A
U1 snRNP components
U1 related factors
105839277
Complex B
105839277
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
Spherulin4
HVO_2833_C
Motif
Other DBs
NCBI-GeneID:
105839277
NCBI-ProteinID:
XP_012540922
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MASNDGIPPPAAVTGFSSATPANIASNFVPPIMPTAPFIPPPSLPPGPPGIMPPQFSIPP
PGFTFPITAAPPQEAGVIAASPQIAAPGIPPPSPISSDATTATMSVSTTAEKKTDWSEHK
APDGRTYYYNSVTKQSLWEKPDELKTPSELLLSQCPWKEYKSENGKVYYHNVNTKESRWS
IPPELEELKARIIAEEAAAAAAAVVANATNSNIAPVAIQHLSPNVATISQTSTPESGGKS
AIEQAMAATLAAINIPTPPAKPDEDSNSAMGSANDSRTSTPEPKMQFKDKKEAVEAFKEL
LRERDVPSNATWEQAVKLIQNDPRYPQMKKLNERKQAFHSYKTQKLKEEREQERLRLKKA
KEDLEQFLLEGGRMLSTTKYYKCEEMFGNLEVWRAVGDSDRRDIYEDVIFNLAKREKEEA
KQLKKRNTKRLAQVLDTMTEVTYRTTWQEAQALLLQHPAFAEDANLLEMDKEDALIVFEN
HIRQLEKDEEEEKECEKKRRKRQERKNRDGFIYLLDELHEQGKLTSMSLWVELYPMLSAD
LRFSAMLGQSGSTPLDLFKFYVEDLKSRFHDEKKIIREILKDKNFEVQVNTTFEEFATVV
CEDRKSATLDAGNVKLTYNLLLEKAEAREKERVKEETRKFKKLETGFKNLLKTLNVDYQM
AWEDVRPKIEEEQDFKAITLESERIRILKEYQHELEESCSHHHIRSKKKKAKKLKRKSRS
RSHSESEGSEKGLRRKRHRSHSPSIPSKSDSSESETKKTKRKKNKKKRGRSHSRSHSGLP
SSEESPERKRKEEKHRRPSIHSEGSATENNEPHEGLSEDELEKQRAQLLRELQLQQEEN
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaatgatggaattccgccacccgctgccgtaacaggattttcatcagcaacg
ccagcaaatatcgcatctaattttgtgccacctattatgcctacggcaccatttattcct
cctcccagtttaccaccaggtcctccaggtataatgccacctcagttttctatacctcca
cctggttttaccttccctatcaccgcggcacctcctcaagaggctggagttatagctgcg
tcaccacaaatagcagcaccaggaattccaccaccctcgcctatcagtagcgatgccact
actgcgacaatgtccgtctctactacggcagagaaaaagactgactggagtgagcataag
gcacctgatggcagaacgtattactataatagcgtcacaaagcaatctttatgggaaaaa
ccggacgagctaaaaacgccaagcgaattgctactgtcacagtgcccctggaaagagtac
aagtcagagaatggcaaggtatactaccataacgtcaataccaaggaatctagatggtcg
ataccgccagagttggaggaactgaaggcacgcattatagcagaggaagctgctgcagcc
gctgcggctgttgtggcaaatgcgacgaattccaacatagctcccgtagctatacaacac
ttgtcgccaaacgtcgcgactatatcgcagactagcacaccagagtcaggtggaaagtcg
gctattgagcaagcgatggccgcaacactcgcagcaatcaatatcccaactccgcccgcg
aaaccggatgaggacagtaattccgcgatgggctcggccaacgatagtcgcactagcacg
cctgaacctaagatgcagttcaaggataaaaaggaagcggtcgaggcattcaaggaattg
ctgagggaaagggatgtgccatcaaatgccacatgggaacaggcagtcaaattgattcag
aatgatcctaggtatccacagatgaagaagctgaatgagcgtaaacaggccttccactca
tacaagacgcagaaactgaaggaggaacgtgagcaagagagactcagattaaagaaggct
aaggaggatttagagcagttcttattagagggcggcagaatgttaagcacaaccaaatat
tacaaatgtgaggaaatgttcggtaatttggaagtttggagagcggtcggagattcggac
cgccgagacatttatgaggatgttatcttcaatttggcgaaacgcgaaaaggaagaggca
aaacaattgaagaagagaaatactaagagattggcgcaagttttggacactatgacagag
gtaacgtacaggaccacatggcaggaagcgcaggcattgttattacaacatcccgcattt
gcggaagacgcaaatttgttagaaatggataaggaagacgctctgattgtattcgagaac
cacattcgtcaattggaaaaggacgaggaggaagaaaaagagtgcgagaagaaacgaagg
aaacggcaggagaggaaaaacagagatggcttcatatatttacttgatgaacttcatgag
caaggcaagctcacgtcgatgtcgctctgggtagaactgtaccccatgttgtccgctgat
ttgcgcttctcagctatgctaggacagtccggttcgactccactggatctattcaaattc
tatgttgaagatttgaaatctcgatttcacgacgagaaaaagatcattcgtgagatactc
aaagacaagaactttgaagtgcaagtaaacacgactttcgaagaattcgccacggtcgtg
tgtgaggatcgaaagtcggcgaccctggatgcgggtaacgttaaattaacatacaattta
ctgctagagaaggcagaagcgcgcgagaaggaacgcgtcaaggaagaaacacgaaaattt
aagaagttggagactggtttcaagaacttgctcaagacattgaatgtagattatcaaatg
gcgtgggaggacgtgaggccgaaaatcgaggaggagcaagatttcaaggcgattacctta
gagagcgaaagaatacggatattgaaagagtatcagcatgagctggaagaaagttgcagt
catcatcatattagaagtaaaaagaaaaaggcaaagaaattgaagcgcaaatcacgatcg
cgttcacatagcgagtcagaaggtagcgaaaaaggcttgaggagaaagcggcacaggtcg
cattcgcccagtattcccagcaagtctgacagttctgaatcagaaacaaagaagaccaag
aggaagaaaaataaaaaaaagagaggccgcagccattcacgttcccattccggtcttcca
tcctccgaggaatccccagagaggaaacgtaaagaagagaaacacagaaggccttccatt
cacagcgaaggttccgctacggaaaataacgagccccatgaaggtctttccgaggatgag
cttgagaaacaaagggcacaacttctgcgcgagcttcaactgcaacaagaagagaactaa
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