Monomorium pharaonis (pharaoh ant): 105839612
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Entry
105839612 CDS
T05760
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105839612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpha03021
]
105839612
Transcription machinery [BR:
mpha03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
105839612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
105839612
NCBI-ProteinID:
XP_012541502
LinkDB
All DBs
Position
3:29293743..29297143
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AA seq
538 aa
AA seq
DB search
MNSSTSTVSKSTVAPSTEQKFSIRVPKNSKKKYNVMRFNATLNVDFSKWNQVKMERENNM
KEYKGLEEELPKFGAGSEFGRDAREEARRKKYGITSRKYKVEDQPWILKSGGKTGKKFKG
IREGGVSENAAYYVFTHAADGAIEAFPLHEWYNFQPIQRYKALSAEEAEQEFSRRNKVMN
YFSLMLRKRLRNDEDGADEEELVEGGKGKRLSKKEKELKISEMDEWMDSDDDESDSDEDD
NKKGSEEEDDGKKKKDKVQLQKKKKKKNASDDEAFEESDDGDEEGRECDYISDSSEPESE
TEGKEIKSVAEEDALRKLLASDEDEDDEEQTDKKNGEEDKDEDEEGKEKDDKDKDKLSKE
MEKRKDKKKKKAKKKDQKKSASGKDSSSDFSSDSESDSDTPLKEKDNKKPNSAHSSRSAT
PTPAASGASDSLKRNWDQSGSSSDLPQAKKLKLDNFNLAPTSYIPGASESGITEDAVRRY
LMRKPMTTTELLQKFKSKKTGLTSEQLVNIMTQILKKINPTKQTIKNKMYLSIKAQSN
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgagtacaagtacagtttcaaaatccacagttgcaccttcgaccgaacaaaaa
ttcagtatcagggtaccaaaaaatagcaaaaaaaagtacaatgttatgagattcaacgca
acactgaatgtagatttttcaaaatggaatcaagtaaaaatggaacgggagaacaacatg
aaggaatacaaaggtctggaagaggaattgccaaagtttggtgctggatccgaatttggg
cgtgacgccagggaggaggccaggaggaagaagtacggtattactagcagaaagtataaa
gtagaggatcagccatggattctaaagtctggaggaaaaactgggaagaagtttaagggc
attcgggagggaggagtcagcgagaatgccgcgtactatgtctttacacatgctgccgat
ggcgcgatagaggcgtttcccctgcatgaatggtataactttcagccgatccagaggtac
aaggccctcagtgctgaggaggctgagcaagaattcagtcgtagaaataaggtaatgaat
tatttctcgctaatgttacgtaagagattaaggaacgatgaggatggtgcagatgaagag
gaattggtggagggtggtaaagggaagagactgagtaaaaaggaaaaggaactgaaaata
tcggagatggacgagtggatggacagtgacgatgatgagtcagacagtgatgaagatgat
aacaagaagggatctgaggaggaggatgatggaaaaaagaagaaagacaaagttcaattg
caaaagaaaaaaaagaagaaaaacgcctcagacgatgaagcatttgaagaaagcgatgac
ggtgacgaggaaggaagggaatgcgattatatttcggattcctctgaacctgaatcagaa
acagaaggcaaggaaattaagtctgtcgcggaagaagacgcgttaagaaaattactcgcg
tctgacgaagacgaagatgatgaagagcaaacagataaaaagaacggcgaggaagataag
gacgaagacgaggaaggaaaggaaaaggatgataaggataaagataagcttagtaaagaa
atggaaaagagaaaggacaaaaagaagaagaaagcgaagaaaaaggatcagaaaaaatct
gcgtcgggaaaggattcgtccagcgatttctccagcgactcggaatcggactcggataca
ccgctaaaagagaaggacaacaagaaacccaacagcgcacacagttcgagatccgcgacg
ccgacacctgcggcgtccggtgcctcggattctctcaaaagaaattgggatcaatctgga
tcatcttcagatttgccacaagcaaaaaaattaaaactcgataactttaacttagctcca
acatcatatataccaggagcgagcgaatcgggaatcacggaagatgcggtaaggcggtat
ttaatgcgcaaaccgatgacaacgaccgagttgctgcagaaattcaaatccaagaagacc
gggcttacatccgagcaacttgtcaacatcatgactcaaatactcaaaaagataaatccc
accaagcaaaccatcaagaacaagatgtacctatcaatcaaagcgcaatccaactga
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