Monomorium pharaonis (pharaoh ant): 105839728
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Entry
105839728 CDS
T05760
Name
(RefSeq) probable small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105839728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105839728
03041 Spliceosome [BR:
mpha03041
]
105839728
03032 DNA replication proteins [BR:
mpha03032
]
105839728
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
105839728
Spliceosome [BR:
mpha03041
]
Complex A
U1 snRNP components
Sm proteins
105839728
U2 snRNP components
105839728
Complex B
U1 snRNP components
105839728
U4/U6.U5 tri-snRNP components
105839728
Complex C
U2 snRNP components
105839728
DNA replication proteins [BR:
mpha03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
105839728
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
105839728
NCBI-ProteinID:
XP_012541685
LinkDB
All DBs
Position
3:27498200..27499135
Genome browser
AA seq
94 aa
AA seq
DB search
MSYKGPQKVQKVMVQPINLIFRYLQNRSRVQVWLFENVNLRIEGHIVGFDEYMNLVLDDA
EEYHQKTKNRKPLGRIMLKGDNITLIQNTNPTVN
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacaaaggaccgcagaaagtccagaaggtgatggtgcagcccatcaacctgata
tttcgctacctgcagaaccgttcgcgcgtgcaagtctggctcttcgagaacgtgaacctt
cggatcgagggacacatcgtcggcttcgacgagtacatgaatctggtgctggatgacgcc
gaggagtatcaccagaagacgaaaaacagaaagccacttggacggattatgttgaaaggc
gacaacatcacgttgattcaaaatacgaatcccacggtaaactaa
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