Monomorium pharaonis (pharaoh ant): 105839915
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Entry
105839915 CDS
T05760
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03030
DNA replication
mpha03420
Nucleotide excision repair
mpha03430
Mismatch repair
mpha03440
Homologous recombination
mpha03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105839915
03420 Nucleotide excision repair
105839915
03430 Mismatch repair
105839915
03440 Homologous recombination
105839915
03460 Fanconi anemia pathway
105839915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpha03000
]
105839915
03032 DNA replication proteins [BR:
mpha03032
]
105839915
03400 DNA repair and recombination proteins [BR:
mpha03400
]
105839915
Transcription factors [BR:
mpha03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105839915
DNA replication proteins [BR:
mpha03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
105839915
DNA repair and recombination proteins [BR:
mpha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
105839915
MMR (mismatch excision repair)
105839915
DSBR (double strand breaks repair)
HR (homologous recombination)
105839915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
SHLD2_OB1
Pox_vIL-18BP
Motif
Other DBs
NCBI-GeneID:
105839915
NCBI-ProteinID:
XP_012542011
LinkDB
All DBs
Position
1:1484470..1489944
Genome browser
AA seq
604 aa
AA seq
DB search
MPYNLTEGSLEKIMRGMDIDKPVLQMLGYKKLPRTVNKDGSATDRYRLLVSDGQKLNSFT
MLATQLNDLITDDILNEFAICKVTNYHLSSVNNSGKEKRVMLILGIDVLVSGNEVGYKIG
NPTNIEMTALKSEPDSTSTSTAGHYQNGSSKIVASNHHASDIPTTPIAALSPYQNRWVIK
VRVTSKSPIRTWSNSRGEGKLFSMDLIDETGEIRCTAFRDACDKFYELIVPGNVYYISRC
TLKVANKQFNTLKNDYEMSMTNDTEIVPCHESSDAIPTLQFNFSPISQIENKEKNDILDV
LGVVTTVNDIQHITARSTGRELVKRDISIVDDSGTMVTVTLWGKQAEDFDGSDNTILAIK
GARVGEFNGGKNLSLISSSVIEKDPDLPEAHKLRGWYTAVGHSESAKSLSRVGGGGGDSN
ASLYTFQEATEARLGEKMNLPDLFAVVATIKQIRTENSVYQACPIESCNKKLIDQSTGVF
RCEKCNKDYPNFKYRLLASMELADATGSRWVTAFNDDAEKILGMSAQELGELKENDKDAY
LQKFGEANFKTFTFNLRAKSEVFQDEMRIRHNCQAVAPINYKTYLTHLIGKVSKLIDLEK
VDLN
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacaatctaacggaaggatcgttggagaaaatcatgcggggcatggacatcgac
aaaccggttcttcaaatgttgggctacaagaagttacccagaactgtcaacaaggatggt
tctgctacagatcggtacagattactagtgtctgatgggcagaaattaaattcattcacg
atgttggctactcaattgaatgatctgatcacagatgatattttgaatgaatttgcgatt
tgcaaagtaaccaactatcacttgagttcagtgaacaacagtggcaaagaaaaacgtgta
atgctgatattgggtattgatgtgctagtttctggcaacgaagttggatacaaaataggt
aatccaaccaacatagagatgacagcactgaaatcagaaccagattctacatctacatcc
acagctggacattatcaaaatggttcatccaaaatcgttgcttcaaatcatcatgcttct
gatatacccaccacaccaattgcagcattaagtccttatcaaaacagatgggtgatcaag
gttcgcgtgaccagtaagtctccgattagaacatggagtaattctcgtggagaaggcaaa
cttttttccatggatctgatcgacgaaactggcgaaattcggtgcaccgcgttcagagat
gcatgcgacaagttctacgaattgatagtgcctggtaatgtttactatatctcacgatgt
acgctgaaagtggcgaacaaacagtttaatacactgaaaaatgattatgagatgtcaatg
actaatgacacagagatcgtgccttgtcacgaaagcagtgatgccattccaacattgcaa
tttaacttctctcccataagtcaaatcgaaaacaaagagaaaaacgacatattagatgtc
ttaggcgtcgttacaactgtcaacgatatacaacatattacggcgcgcagtactggccga
gagcttgtgaagagagatattagtattgttgatgacagtggtacgatggtaactgttaca
ctatggggaaagcaggccgaggactttgatggttctgataacaccattttagctatcaaa
ggagcacgcgtgggtgaatttaatggtggaaagaacttgtcattaataagttcttccgta
attgaaaaggatcccgatcttcctgaagcacataaattgcgcggatggtacactgcagtc
ggtcattcggagagtgctaaatcattgtctagagtaggtggaggcggaggtgactctaac
gcgtcgttgtacactttccaggaggcgaccgaagctcgattaggagagaaaatgaatctc
ccagatttatttgcagtcgtggcgaccattaaacagatcagaacggaaaattcagtttac
caggcgtgtccgatagaaagttgcaacaaaaagttaatcgatcaatctactggagtcttt
agatgtgagaagtgtaacaaggactatccaaatttcaaatatcgcttactggcaagcatg
gaattggccgatgcgacaggcagtcgctgggtaactgccttcaatgatgatgctgaaaag
atattgggaatgtcggcgcaagaattgggggagttgaaggagaacgataaagatgcctac
ttacaaaaattcggcgaagcgaatttcaagacgtttacatttaacttgagggcgaaatca
gaagtttttcaggatgaaatgagaataaggcacaattgtcaggcagttgcgccaataaat
tacaagacttatttaacccatctgataggcaaagtctccaagttaatagacctcgagaaa
gtagatcttaactaa
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