Monomorium pharaonis (pharaoh ant): 105840003
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Entry
105840003 CDS
T05760
Name
(RefSeq) nuclear pore complex protein Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105840003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105840003
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105840003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
DUF4653
Motif
Other DBs
NCBI-GeneID:
105840003
NCBI-ProteinID:
XP_012542157
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Position
2:complement(26136860..26140709)
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AA seq
626 aa
AA seq
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MSFGSGFGPSTSTPAPTFAFGTTPASTATAVKPVAGFGTPSFGFSTPTTSTPSLFGTPST
QTTGFGTGTGFGTPTATGFGSAPSTGGFGSAPTFGTASTSAFGSAPAFGSTPASSTATGF
GTTSTFGTPVCTTSGFVGFGTPTTATLSFGGFGGFGTTTTTSTPSLFSGFGTGSTSSTGF
GTTTGFGAFGTKPVTTSATGFGGFGTGTGFTGFGTGLTQPQQQQQQQQQQQQQPTNTASE
ALYNAVFNCQLYNDERDNTIARWNLIQALWGTGKAYYSINAPPIELTQENSLCRFKAIGY
SRIPDADNNDGLVVLCFNKKEKDVQDGKQQLIVFLNGLLGNKPNLTVTVDNIKSTGETKS
QVTIYVSEKGITGSYRKIPANELVAYLSQVMQKQQLVQNGVEDIFPLVKLDPSQLKEYLD
NPPCAIDARLWKQAQLDNPNPELYIPVPTIGFQQVKHRLKCQEEETARHRAFLDMAAEKI
QGLQRQHTATQARLKEHRRTLLELQHRVLQILVRQEITRKVGLSLQPEEEVLTRRFEAMH
SQISAPTQYKGRISEMLSQLRMRRHIDIQNQERYTMDPIAQDDIKTYLSMEQQGMAQLIS
TINADLESLKVIKDGMSELLMSQSIS
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcggcagcggcttcgggccgtccacgtcaacacctgcacccacgttcgccttc
ggcaccacgccagcgtccacggcgacagcagttaaacctgtggcaggatttggaacgccc
tcgtttggatttagtacgccgactacttcaacgccaagtctgttcggcacgccgtcaaca
caaacaactggattcggtactggcactggatttggtacgccaacggccactggttttggt
agcgcacctagcactggtggttttggttctgcgcctacgtttggtaccgcatcaaccagc
gccttcggctcggcaccggccttcggtagtactcccgcttcctccaccgcaactggattt
ggtacaacctcgacatttggcactcctgtttgtaccacgtccggttttgttggtttcggg
acaccgacgacggcgacgttaagtttcggcggttttggcggttttggtacgaccaccact
acatctacccccagcctgtttagcggatttggcactggaagcacctcttcaactggtttt
ggcacaaccacaggttttggtgcattcggaaccaaaccggttaccaccagtgctactgga
ttcggtggatttggtacagggacaggattcactggatttggtactggattgacacagcct
cagcagcaacagcaacaacaacaacaacagcagcagcaacctacaaatactgcgtcagaa
gctctctataatgctgtgtttaattgtcagttgtataacgatgagcgagataataccatt
gcgaggtggaatcttattcaagcattatggggtacaggaaaggcttactattccataaat
gctccacctatagagctcactcaggaaaattcgttatgtagatttaaagccattggatac
agtcgcatacctgatgctgacaacaacgatggtttagtagtattgtgttttaataaaaaa
gaaaaggatgtacaggatggaaagcaacagttaatagtatttctcaatggtttgttggga
aataaacctaatctgacagtaactgttgacaatatcaaatcaacgggggagaccaagagt
caagtgacaatatacgtatcagaaaaaggaattactggttcttacagaaaaattcctgct
aacgaattagtcgcgtatctgtcgcaagtcatgcaaaagcaacagttagtacagaacgga
gtggaagacatatttccgttggtaaagcttgatccgtcccagttaaaagagtacctagac
aatccaccttgtgctattgatgccagattgtggaagcaagcgcagttggacaatcccaat
ccggagctgtatattccagttccaacgatcggttttcaacaagttaagcacagactgaaa
tgtcaagaagaggaaactgctagacacagagcgtttctagatatggcggctgaaaagata
caaggcttacaaaggcagcacacagctacacaagcccgacttaaagaacatagacgtaca
ttattggaacttcaacacagggttctacagatactagtacgacaggagattacacgaaag
gttggattatctttacaaccggaggaagaggttttaacacgtagatttgaagcaatgcat
tcgcaaatcagtgctccaacgcagtataaaggtagaattagtgaaatgctctctcaactc
agaatgagacggcatattgatattcaaaaccaagagaggtatacaatggatcctatagca
caggatgatattaaaacgtatctaagtatggagcagcagggcatggcgcagcttatttcg
acaataaacgccgatttagaaagtttaaaagttattaaggatggaatgtcagagctttta
atgagccaaagtatatcttga
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