Monomorium pharaonis (pharaoh ant): 105840099
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Entry
105840099 CDS
T05760
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105840099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mpha03041
]
105840099
03009 Ribosome biogenesis [BR:
mpha03009
]
105840099
Enzymes [BR:
mpha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105840099
Spliceosome [BR:
mpha03041
]
Complex A
U1 snRNP components
U1 related factors
105840099
Complex B
105840099
Ribosome biogenesis [BR:
mpha03009
]
Eukaryotic type
Pre-60S particles
Helicases
105840099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
105840099
NCBI-ProteinID:
XP_012542317
LinkDB
All DBs
Position
5:complement(28658542..28675866)
Genome browser
AA seq
750 aa
AA seq
DB search
MYNAYSQYNNTYRYRGNREHGNRNGGVGGTFWNSQQQQQQQQQQHGQKDHLTKKHKKTPG
DLLKKPIWDLQNMPPIKKNFYDPHRNVLNRTPDEISKYYAGKEITVKGNNTPFPIQAFEE
SNFPDYVMNEIKKQSFAEPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYILPAIVHINN
QPRLSRGDGPIVLILAPTRELAQQIQTVARDFGSSSHIRNTCIFGGSPKGPQARDLERGV
EICIATPGRLIDFLEKGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMW
SATWPKEVQALAEDFLTDYIQINIGSLTLAANHNIRQIIEICQEHEKEMKLSQLLREIGT
ERNKMIIFVETKKKVDDITKTIKREGWPAISIHGDKSQPERDYVLSEFRNGKTMILVATD
VAARGLDVEDVKYVINFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTPNNARQAKELIAV
LEEAGQAINPQLADLANSVKNQYGKGRTRWYNLRTQLNHYNKDNSSHGSPRNNISPTANS
WQQHMLQQASQQQHGHHNQMMQEKPMARHHPRNNGNNYQTNRQSHQQNSYQPQHSYQQQH
QQRQQSITSYHPNTGYPHQATNNACQPTAHQTNGAGPRGYQGRTGYQGNRFQSNRQNTFG
GGGNQQQQQNQTPNQHVYSAMPPPFMMPSGAAGHADSGIQSLVNNKFFQTAATNRAPPNA
GACAYQSMGYGQFQAVPPYGYPYPPTPVQQ
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacgcgtactcccagtacaataatacttaccgatatagaggaaatcgtgaacat
ggcaatcgtaatggaggagtaggtggaactttctggaacagtcagcagcagcagcagcaa
cagcaacagcagcacggtcaaaaagaccacctcacaaagaagcacaagaagacaccgggt
gatttgttgaagaagcctatttgggatctacaaaatatgcctccgataaagaagaatttt
tatgatccccaccgcaacgttctgaatagaacgcccgatgagatcagcaaatattatgcg
ggcaaagagatcaccgtcaaagggaacaacacgccctttcccattcaggccttcgaggaa
agcaactttccagattacgtgatgaacgagattaagaagcagagcttcgccgagccgact
gcaattcaagctcagggctggccgatcgcgcttagcggacgagatttagttggaatcgct
cagactggttccgggaaaactttagcttacatccttccggctatagtacacatcaacaat
caacctcgtctcagccgcggcgacggaccgatcgttctgattctcgcgcccacgcgcgaa
ctggcacaacagatccaaacggtcgcgcgcgatttcggctcgtcttcgcacatacgcaac
acatgcatcttcggcggctcgccgaagggcccgcaggcccgcgatctcgagcgtggtgtg
gagatctgcatcgcgacgcccggcagactgatcgactttctcgagaaaggcacaacaaac
ctacgtaggtgcacatacctcgttttggacgaggccgaccgtatgctggacatgggtttc
gaaccgcagatacgcaagattatcgaacagattcggcctgaccgacaggtgctcatgtgg
tccgccacttggcccaaagaagtgcaggcccttgccgaggacttcctcaccgactacatt
cagatcaacatcgggtccctgacgctggcggccaaccacaacattcgacagatcatcgaa
atctgccaggagcacgagaaggagatgaaattgtcacagttgctgcgcgagatcgggacc
gagcgcaacaagatgatcatcttcgtggagacgaagaagaaggtggacgacattacgaag
acgatcaagcgcgagggctggccggcgatttcgatccacggcgacaagtcgcagccagag
cgcgattacgttttatcagaattccgcaatgggaagaccatgatcctggtcgcgacggac
gtagcggcgcgcggcctggatgtcgaggacgtcaagtacgtgatcaactttgattatccg
aacagttccgaggactacatccacaggatcggcagaaccggtcgctgccagagcgcgggc
accgcttatgcttacttcacaccgaataacgcgcggcaggcgaaggagctgatcgcagtg
ctggaggaggccggccaggctataaacccgcagttggcggatctggcgaactctgtcaag
aaccagtacggcaagggacggacacggtggtacaacctgcgcacgcagctgaatcactac
aacaaggacaacagttcccacggaagtccgagaaacaacataagcccgacggcgaacagc
tggcagcagcacatgttgcaacaggcgagccaacagcagcacggacaccataatcagatg
atgcaggagaagccaatggcacgtcatcatccgcgtaacaacggcaacaactatcagacc
aatcgccagagccatcagcagaattcctaccagccgcagcattcgtatcagcaacagcat
cagcagcgacagcagtccatcaccagttaccacccgaacacaggctaccctcatcaggcc
actaacaacgcttgccaacctaccgcgcatcagactaacggcgcaggtcccagagggtac
caaggtagaaccggatatcagggtaatcgtttccagagtaatcggcagaacactttcggc
ggcggtggcaaccagcagcagcagcagaaccagacgcccaatcaacacgtttactcagca
atgccgccgcccttcatgatgccgtccggcgcagctggacacgccgactccgggattcag
agccttgtcaacaacaagttcttccagaccgccgccacgaatcgagcgcccccgaacgcc
ggtgcctgcgcctatcagtcgatgggctatggccagtttcaagcggtgccgccgtacggt
tatccgtacccgcccacgccggtgcagcagtga
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