KEGG   Monomorium pharaonis (pharaoh ant): 105840307
Entry
105840307         CDS       T05760                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
mpha  Monomorium pharaonis (pharaoh ant)
Pathway
mpha03013  Nucleocytoplasmic transport
mpha03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mpha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105840307
  09122 Translation
   03013 Nucleocytoplasmic transport
    105840307
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpha03019]
    105840307
   03041 Spliceosome [BR:mpha03041]
    105840307
Messenger RNA biogenesis [BR:mpha03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     105840307
Spliceosome [BR:mpha03041]
 Complex C
  Other components
   EJC/TREX
    105840307
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105840307
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st EIF3I WDR55 ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st Beta-prop_HPS5 Tricorn_2nd eIF2A RMC1_N Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th NBCH_WD40 DSE1_N Beta-prop_TEP1_C PAC11 B-prop_COPA_B_2nd Beta-prop_ELP1_1st TRM82_WD PD40 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_Nup120_160 PROPPIN DPPIV_N
Other DBs
NCBI-GeneID: 105840307
NCBI-ProteinID: XP_012542667
LinkDB
Position
11:12549944..12552575
AA seq 322 aa
MAVTTLRVEELISYFKSHNKIREQQSHSAKVHSVGWSCDGKYLASGSFDKSVCIFSLCPD
RLKQETTFRGHGGSVDQLCWHAFCPELLSTASGDKTVRIWDTRTQKCTANISTRGENINI
SWSPDGNTIAVGNKEDLVTFIDARVMKIRAEEQFNFEVNEISWNKDSDTFYLTNGQGCVH
ILSYPELELLHVIKAHPGTCICIEFDPTGQYFATGSADALVSLWDADELCCLRTFSRLEW
PVRTISFSYDGQLLAAASEDLVIDIGEVQTGEKIADVPVEAATFTVAWHPKQYLLAYACD
DKDSYDRKRDAGSLKVFGFAND
NT seq 969 nt   +upstreamnt  +downstreamnt
atggcggttaccactttgcgtgtagaagaattaataagttattttaaatcacataataaa
atccgagaacaacagagtcattcagcgaaagtgcatagtgtaggatggagttgtgacggt
aaatacttggcttcaggttccttcgacaagtccgtttgcatattttcgctatgcccagat
cgtttgaagcaagaaacgacttttaggggacacggcggtagcgtagaccagttgtgctgg
cacgctttctgtccagaattactatccacagcaagcggtgacaagacggttcgtatctgg
gacacgagaacgcagaaatgcacagcgaacatcagtacccgtggggagaacatcaacata
tcgtggtcgccagacggtaacacgatcgccgtcgggaacaaggaggacctagtcacgttc
atcgacgcccgggtgatgaaaatacgcgcggaggaacagttcaacttcgaggtaaacgag
atctcatggaacaaggactcggatacgttctacctgacgaacggccagggttgcgtgcac
atacttagttatccagagctggagttgttgcacgtgatcaaagcacatcctggcacgtgc
atctgcatcgagttcgatccaaccggtcagtacttcgctactggatccgcagacgcgctg
gtctcgctgtgggatgccgatgagctatgctgcctaagaacgttctcgcggctggagtgg
ccggtcaggacaatctccttctcgtacgatggacagctgctggcggcggcttccgaggat
ctggttatcgacatcggcgaggtgcagactggcgagaaaatcgccgacgtcccagtagag
gcagcgaccttcactgttgcgtggcaccccaaacagtatcttctagcttacgcgtgtgac
gacaaggactcttatgaccgaaaacgcgatgccggtagcttgaaagtatttggtttcgca
aacgactga

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