Monomorium pharaonis (pharaoh ant): 105841117
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Entry
105841117 CDS
T05760
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpha04131
]
105841117
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mpha04812
]
105841117
Enzymes [BR:
mpha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
105841117
Membrane trafficking [BR:
mpha04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
105841117
Cytoskeleton proteins [BR:
mpha04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
105841117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
MIT
RuvB_N
AAA_5
AAA_22
TIP49
AAA_16
NPHP3_N
Mg_chelatase
AAA_14
IstB_IS21
DUF815
nSTAND3
Motif
Other DBs
NCBI-GeneID:
105841117
NCBI-ProteinID:
XP_012543695
LinkDB
All DBs
Position
1:857962..865035
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AA seq
721 aa
AA seq
DB search
MSCSDGARPSITRKYGTKSPKKLCVTKSENGDKTTTTISCAGHRHNHYHHGHYRGFLEGI
PQPSVHKRNLHIVSYPLILLFNVLRTLLYQLFVVFKYLYTSTSQLIQRRQASKQACQLEI
VVGQKPTDSQRTINGNRIEDTEIMSQVPRRPIGPGPGDPLLAKQKHHHRRAFEFISKALK
IDEDNEGQKEMAIELYKKGIGELEKGIAVECTGGTGEVWEHAQRLHDKMCTNLAMAKDRL
DFLVSVRELRKLGINHDINNRASGNKTDSEHPGKHLRARRNTHTFQTARTSLNINHNRNT
NNIHMTINAKQTMCTQIPKLRPRSPKNSFAHTTEASGRKLSVPGKRMTGTPLSKSQTLPR
SMGRSTPIQSCHRTIPIKPSSTPPSVKRQLSVPSNGSPVRRPGTPTTSNSNKSTPTRKVP
VLKGVDPKLAQVILDEILEGGAPVQWEDIAGQETAKQALQEMVILPSLRPELFTGLRTPA
RGLLLFGPPGNGKTLLARAVATQCNATFFSISAASLTSKYVGEGEKLVRALFAIAREFQP
SVIFIDEVDSLLSERKDNEHEASRRLKTEFLVEFDGLPCNPEERVLVMAATNRPQELDEA
ALRRFTKRVYVTLPDLQTRIVLLRRLLAKHNDPLTFDELNEMAVLTEGYSGSDLTGLAKD
AALGPIRELNPDQVKELDLNSVRNITMQDFRDSLKRIRRSVSPASLAAYEKWNFDYGDVS
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgcagcgatggtgcgcgaccatcgattacacgtaaatacggcacaaagtcgccg
aagaaactgtgcgtgaccaagagtgagaacggcgacaagaccacgacgacgattagctgc
gccggccaccgtcataaccactatcatcacggtcattatcgtggcttcctggagggaatt
ccgcagccatcggtacataaacgcaatctccatatcgtctcctatccactgatactgctg
ttcaatgtgctgcgcacgctgttgtatcagctgtttgtggtgttcaagtacttgtacact
tctacgtctcagctgatccagcgcaggcaggcgtccaaacaggcctgtcaattggagatt
gtcgtagggcaaaagccaacggatagccaacgtacgattaatggtaacaggatagaagac
acagagatcatgtcgcaagtgcctagacggcccattggaccaggtcccggagacccgttg
ctagccaagcagaagcatcatcaccgcagagcattcgagtttattagcaaagcgctcaag
attgacgaggataacgaaggacagaaggaaatggcgatagaattatacaaaaagggaatt
ggagaattggagaagggaatagctgtagaatgtactggtggaactggtgaggtatgggaa
cacgcacaaagacttcatgacaagatgtgtacgaatctggcgatggcgaaagacagactc
gatttccttgtgagtgtgcgtgagctgagaaagctgggtatcaaccatgatatcaacaat
cgcgcatctggaaataaaacggacagcgaacatccgggaaagcatctgagggctcgccgc
aacacacacacttttcaaaccgctcgaacttcactcaacattaatcacaatagaaacaca
aacaatatacacatgacaattaacgccaaacagactatgtgtactcagattcccaagtta
aggccacgttcaccaaaaaacagtttcgctcatactactgaagcatccggcaggaaacta
tcggttcctggcaaacgaatgacaggaacgcccctaagtaagagtcagacgctgcctcga
agcatgggtagatcgacgcctattcaatcttgtcacaggaccatacctatcaaaccgtcc
tctacgcccccctctgtgaaaagacagctgtctgtgccgagcaatggttcacctgtaaga
cgtccaggaactcccactacctcgaacagtaataaaagcacacctaccagaaaagttccc
gttttaaaaggcgtggatccaaaactcgcgcaagtgattctcgatgaaatcttagaagga
ggagcaccagtgcaatgggaagacatcgctggtcaagagaccgcaaagcaggctttacaa
gagatggtaatcctaccgtcactacgacccgaattatttaccggtctgcgaacacccgcg
agaggattgttactgtttggaccaccaggaaatggaaagacattgttagcgcgtgccgtt
gcaactcaatgtaacgcaacatttttttcaatttctgccgctagtctcacatcgaaatat
gtcggagagggtgaaaaattagtgagggctctattcgctatcgctcgagagtttcagcca
tctgttattttcatcgatgaagtggattcattattgagcgaacgaaaggataatgaacac
gaagcctcgaggagactaaaaacagaattcttagttgagtttgacggtttaccgtgcaat
ccagaagagagagtgctcgttatggctgctacgaatagaccacaggaattagacgaggct
gcattaaggcgattcacaaaacgtgtgtatgtcacattgcctgacttgcagacgaggatt
gtcttactccgaagacttttggctaaacacaatgatccattgacgttcgacgagttgaac
gagatggcagttcttacagaaggatattcgggaagcgatttgactggattagctaaagac
gcagcacttgggcctatcagagaactgaatccagatcaagtgaaagaattggatctcaat
tccgttcgtaatatcacaatgcaagatttccgtgattctttaaaaagaattcgcagatcc
gtttcgccggcaagtttagctgcctatgagaagtggaactttgactatggagatgtgagt
ctttga
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