Metamycoplasma phocicerebrale: DMC14_000875
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Entry
DMC14_000875 CDS
T06657
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mphc
Metamycoplasma phocicerebrale
Pathway
mphc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mphc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DMC14_000875 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mphc03400
]
DMC14_000875 (uvrB)
DNA repair and recombination proteins [BR:
mphc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DMC14_000875 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DMC14_000875 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
UvrB_inter
UvrB
ResIII
DEAD
UVR
Glyco_trans_4_3
AAA_22
Kinesin
HAD_Pex22
AAA_7
AAA_30
Flavi_DEAD
T2SSE
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AZZ65346
UniProt:
A0A3T0TTP9
LinkDB
All DBs
Position
complement(49270..51240)
Genome browser
AA seq
656 aa
AA seq
DB search
MNNFKLFSKFQPSGDQPQAIQKLVDGIKNNKKHQVLLGVTGSGKTFTLANVIAKTNRPAL
VISHNKTLASQLYTELKELFPENRVEYFISYFDYYRPEAYIVSSDQYVEKTSKNNKQIEA
MRMSAVNALSTRRDTIVVASVASIYGEFNPQEYRKHFFPLSLHQKITRKEIMRNLVKLRY
DNKRFSPNIEQGEFNSFGNIITLSPGYKFDYNIQIELYDDEIQSINFIDPITKDIVEKKE
EITIFPSTTYLINMENMEQICKEIEQEMLDRVVFFKEKEKYIEAQRIEDRTRNDLDSIRE
FGYTNGMENYARYMDGRKQGQKPYTLFDYLHKDTIIYIDESHLMLPQLKGMYEGDRSRKE
TLVNYGFRLPSALDNRPLKYSEYQDIDLPRIYLSATPGDEEISNADGEVITQFIRPTGLL
DPVIEIKPKANQINIIHDLLKNQISKNERTLILTHTKKSAEELAYYLKEKKFKSAYIHNE
FKVFERNNILNGLRLGKYDVVIGINLLREGIDLPEVSLILVLDADVTGLSRDKRSLIQIV
GRAARNDHGKVIFFADEMTQAMKDTIDDNLLKRSIQQKYNTEHNIVPQTIIKPIPKTIQD
VAMNFKIQDVGKEPNAYNRKYIKQLIREMDEAAKARDFDKAIQIQTYLKENNIDID
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgaataactttaaacttttttctaaatttcaaccttcaggagaccaacctcaagctata
caaaaattagtagacggtataaaaaataataaaaaacatcaagttttattaggagttaca
ggttctggtaaaacatttactttagcaaatgttatagctaaaacaaataggcctgcttta
gttattagtcataataaaactttagctagtcaattgtatactgagttgaaggagctgttt
cccgaaaatagagtggaatactttatttcttattttgattattatcgtccagaggcttat
attgtttcttctgaccaatatgttgaaaaaacctctaaaaataataaacaaattgaagcc
atgagaatgtctgctgtcaatgctttaagtacaagaagggatactattgttgttgctagt
gtggcttcaatttatggagaatttaatccacaagaatatcgaaaacacttttttccttta
agtttacatcaaaaaattacaagaaaagaaataatgagaaatttagttaaattgcgttat
gacaataaaagattttctccaaatattgagcaaggggaatttaatagttttgggaacatt
attacattaagccctggttataaattcgattataatattcaaatagaattgtatgatgat
gaaatacaaagtataaattttattgatccaataacgaaagatattgtggaaaaaaaagaa
gaaattactatatttccttctactacatatttaataaatatggaaaatatggagcaaatt
tgcaaagaaattgagcaagaaatgcttgaccgagtagttttttttaaagaaaaagaaaaa
tacatagaagctcaaagaattgaagatagaacgcgcaatgatttagactctattagagaa
tttggctacactaatggcatggaaaattatgcaagatatatggatggtagaaaacaaggt
caaaaaccatatactttatttgattatttacacaaagatacaattatatatattgatgaa
agccacttaatgctacctcaattaaaaggtatgtatgaaggagatagatcaagaaaagaa
acacttgttaattatggttttagattaccttcagctttagataacagaccattaaaatat
agtgaatatcaagatattgatttgcctagaatttatttatctgctaccccaggcgatgaa
gaaatttcaaatgcagatggagaagttataactcaatttataagacctacagggttgcta
gatccagtaattgaaattaagccaaaagctaatcaaattaatataattcatgatttgtta
aaaaatcaaatttcaaaaaacgaaagaactttaattttgacgcatactaaaaaaagtgct
gaagaattagcttattatttaaaagaaaaaaagtttaaatctgcttatatacacaatgaa
tttaaagtgtttgaaagaaacaatattttaaatggtttaagacttggaaaatatgatgtt
gttattggaattaatttattaagagaaggaattgacttacctgaagttagtttgatttta
gttttggatgctgatgttacaggattatctagagataaaaggtcgttaattcaaattgtt
ggtagggcagctagaaatgaccatggaaaagttatattttttgctgatgaaatgactcaa
gctatgaaagatacaattgatgataatttattaaaaagaagtattcaacaaaaatataat
actgaacataatattgttcctcaaacaataataaaacccattcctaaaacaatacaagat
gtagctatgaattttaaaattcaggatgttggaaaagaaccaaatgcttataatagaaag
tatataaaacaattaattagagaaatggatgaagctgcaaaagctagagattttgacaaa
gcaattcaaattcaaacatatttaaaagaaaataatatagatatagattaa
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