Mycoplasma phocoenae: HGG69_00535
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Entry
HGG69_00535 CDS
T08105
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
mphe
Mycoplasma phocoenae
Brite
KEGG Orthology (KO) [BR:
mphe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mphe03009
]
HGG69_00535 (rlmD)
Enzymes [BR:
mphe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HGG69_00535 (rlmD)
Ribosome biogenesis [BR:
mphe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HGG69_00535 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
RrnaAD
Methyltransf_31
Cons_hypoth95
Methyltransf_15
TRM5-TYW2_MTfase
MTS
N6_N4_Mtase
Fn3_Dep-1_2nd
Motif
Other DBs
NCBI-ProteinID:
QJG66821
UniProt:
A0A858U470
LinkDB
All DBs
Position
149081..150424
Genome browser
AA seq
447 aa
AA seq
DB search
MQKYNIGDKLKKITVTEFSYEGYGVYRDDNVTILIDGALENEVVDIVLTKVNSKIIYADV
VNIKKKSSSRLKDINKTIIESGVAPLAIINYSEQLLFKTNVVKTLAERQLNYFDTKDILA
CEKEWNYRNKVTVFAELKNGMYKFGTYKRNSHKLIEMKQMPLAKNVLNKVLIWLVENFNK
FDTKNSRIKNITMKCNEKEDCVQVVFSSYTKTNIDKTFIDVFVSENPEIKSIIQTIENLD
NKSDTYGALSKVILGETHIVDSIEDNKFIVEWNAFFQVNPYQTKHLYKTMVSNLNITKND
IVLDAYSGIGTISTFLSKKAKSVYAVEIVEEAGKNGYQSAQMNGIDNIFFYTGNIDEELK
NINDIGVVFDIVCVDPPRNGLTKEFIDLISMHKPRGIGYISCNPHTLIRDLKLFKDKGYK
IKMIQPVDMFPQTHHIECVAILEKINQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaatataatattggggataaattaaaaaaaataactgttactgaatttagttat
gaaggttatggtgtatatagagatgacaacgtaacaatattgattgacggtgccttagaa
aatgaagttgttgatattgtattaacaaaagtaaattcaaaaattatttatgcagatgtt
gttaatattaaaaagaaaagctcgtcaagattgaaagatattaataaaactattattgaa
agtggtgttgcgccacttgcgataattaattattctgaacaacttttatttaaaacaaac
gttgttaaaacacttgcggaaagacaattgaattattttgacaccaaagatattttggct
tgtgaaaaagaatggaattaccgtaataaagtaactgtttttgctgagttgaaaaacggt
atgtataaatttggtacatacaaaagaaattcgcataaacttatcgaaatgaaacaaatg
cccttggctaaaaatgtattaaataaagtattaatttgattggttgaaaactttaataag
tttgatacaaaaaattcaagaattaaaaatatcacaatgaaatgtaatgaaaaagaggat
tgtgttcaggttgttttttcttcatacaccaaaacaaatattgataaaacatttattgat
gtttttgtaagtgaaaaccctgaaataaaatcaataattcaaactattgagaatttggat
aataaaagcgacacatatggcgctttatcaaaggttatattaggtgaaacacatattgtt
gattcgatagaggacaataaattcattgtcgaatgaaatgcattttttcaagtcaatcca
tatcaaacaaaacatttatataaaacaatggtttcgaatttaaacattactaaaaatgac
atcgtattagatgcgtattcgggaataggaaccattagtacctttttatctaaaaaagca
aagagtgtatatgctgttgagatagtggaagaagctggaaaaaacggttatcaatcagcg
caaatgaacggtatcgacaacatattcttttacacaggtaatattgacgaagaattaaaa
aacataaatgatatcggtgttgtttttgatattgtttgtgttgacccaccaagaaacggt
ttaactaaagaattcattgatttaatatcaatgcataaacctagaggaattggttacata
agttgtaatccacatacattgattagggatttgaaattatttaaagataaaggttataaa
attaaaatgatacaacctgttgatatgtttcctcaaacacatcatattgaatgtgtagca
atattggaaaagattaatcaataa
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