Mangrovibacter phragmitis: MPHASIOC01_000531
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Entry
MPHASIOC01_000531 CDS
T10640
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mphg Mangrovibacter phragmitis
Brite
KEGG Orthology (KO) [BR:
mphg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mphg03009
]
MPHASIOC01_000531 (rimO)
Enzymes [BR:
mphg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
MPHASIOC01_000531 (rimO)
Ribosome biogenesis [BR:
mphg03009
]
Prokaryotic type
ribosomal protein modification factors
MPHASIOC01_000531 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Methyltransf_2
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
XCE75706
LinkDB
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Position
complement(574522..575832)
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AA seq
436 aa
AA seq
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MSKIGFLSLGCPKNLVDSERILTELRTEGYDVVPSYDDADLVIVNTCGFIDSAVQESLEA
IGEALNENGKVIVTGCLGAKEDQIRDVHPKVLEITGPHSYEQVLNHVHHYAPKPEHDPFV
SLVPKQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLDSRAIGEVLDEAKRLVEAGV
KELLVISQDTSAYGVDVKHRTGFWNGQPVKTSMVSLCEQLSRLGVWTRLHYVYPYPHVDE
VIPLMAEGKILPYLDIPLQHASPRILKLMKRPGAVERTLERIKRWREICPELTLRSTFIV
GFPGETEEDFQMLLDFITEARLDRVGCFKYSPVEGATANELPSPVPEDIKEERFHRFMQL
QQKISAERLQEKVGREILVMIDETDEEGAIGRSMADAPEIDGAVYLNGETHLKAGDIVKV
KVENADEYDLWGSLVR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaattggatttctgtcgttaggttgcccaaagaatctggtggattcagaacgc
atcctgactgaattacgtactgaaggctatgatgtggtgcccagttatgatgacgccgac
ctggtcatcgttaacacctgcggttttatcgacagcgcagtccaggaatcactggaagcg
attggtgaagctttaaacgaaaacggtaaagttatcgtcaccggttgccttggggcaaag
gaagatcaaattcgtgatgtccatcctaaggtgttggaaattactgggccgcatagctat
gaacaggtgctgaatcatgttcatcactatgcccccaaacctgaacatgatccgtttgtc
agcctggtgcctaaacaaggcgtaaaactaacgccgcgccactacgcttacctgaaaatt
tcagaaggctgcaaccatcgctgcaccttctgtattattccttccatgcgtggtgacctc
gacagccgggcaattggtgaagtgttggatgaagccaaacgcctggttgaagccggagta
aaagaactgctggttatttctcaggatacctctgcctacggcgttgacgtgaagcaccgt
accgggttctggaatgggcagccggtgaaaaccagcatggtcagcctgtgtgaacagctt
tcccgtcttggtgtctggactcgtctgcactatgtctacccatatccccacgtagatgaa
gtcattccgttaatggcggaaggtaaaatcctgccttaccttgatatcccgttgcagcat
gccagccccaggatcctgaagttgatgaaacgccccggggccgttgagcgcacccttgag
cgtattaagcgctggcgtgaaatttgccctgagttaaccctgcgttcaaccttcattgtc
ggtttcccgggggaaacagaagaagacttccagatgctgctggatttcattaccgaagcg
cgccttgaccgtgttggctgttttaaatacagccccgtggagggagcaacagccaatgag
cttccgtctccagtgccagaagacatcaaagaagaacgcttccaccgctttatgcagttg
cagcagaaaatttctgcagaacgcctgcaagaaaaagtggggcgagaaattctggtcatg
attgatgaaactgatgaagaaggtgcgattggccggagtatggctgacgcaccggaaatt
gacggggcagtataccttaatggtgagacccacctgaaagccggggatattgttaaagtg
aaggtggaaaacgcagacgaatacgatctgtggggttcactggttcgctaa
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