Mangrovibacter phragmitis: MPHASIOC01_001460
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Entry
MPHASIOC01_001460 CDS
T10640
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
mphg Mangrovibacter phragmitis
Brite
KEGG Orthology (KO) [BR:
mphg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mphg03009
]
MPHASIOC01_001460 (dbpA)
Enzymes [BR:
mphg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MPHASIOC01_001460 (dbpA)
Ribosome biogenesis [BR:
mphg03009
]
Prokaryotic type
rRNA helicases
MPHASIOC01_001460 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Helicase_C_2
AAA_22
YlmH_RBD
Toxin_2
ALTTAQ_rpt
Motif
Other DBs
NCBI-ProteinID:
XCE76561
LinkDB
All DBs
Position
complement(1540347..1541720)
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AA seq
457 aa
AA seq
DB search
MTSFAELNALSSQQLATLETLGYLAMTPVQAAALPAILSGRDVRAQAKTGSGKTAAFGLG
LLQHIDATQFTTQSLVLCPTRELADQVAGELRRLARATPNIKVLTLCGGVPFNAQRDSLT
HAPHIIVATPGRLLDHLNKQTVSLSALRTLVLDEADRMLDMGFAEAIDEVVAFAPAQRQT
LLFSATWPVAIAAISQRYQHEPLAIEIDTAEALPAVQQQFYEVPRNQKIAVLQALLSREK
PASCVVFCNTKKDCQAVCDALTASNQSVLALHGDMEQRDRDQTLVRFANGSSRVLVATDV
AARGLDIKALAMVVNFELAWDPEVHVHRIGRTARAGESGLAVSLCAPEEATRANVLEEML
HITLNWCPQPATGKVLPLEAEMATLAIDGGKKAKMRPGDILGALTGDIGLDGADIGKIAI
HPMHAYVAVKQSVARHAWKQLQQGKIKGKSVKVRLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgacctcatttgctgaacttaacgctctgtcttcccaacaactcgcgacacttgaaacg
ctcggctacctggcgatgacgccggttcaggccgcggcattgccagccattcttagtgga
agagacgtccgggctcaggcaaaaaccggaagcggtaaaacagcagcctttggtcttggt
ttgttgcagcatattgatgcgacacaatttactacccagtctctggtgctttgcccgaca
cgcgaattagccgatcaggttgcaggtgaactgcgccgtctggcgcgtgccacgccaaat
attaaggtgctgacactctgtggcggagtgccatttaatgcgcagcgtgattcactgacc
catgcaccgcatattatcgtggcaacgcccgggcggttactggaccacctgaacaagcag
accgtgagcctgtctgcattacgtactctggtgctggatgaagcagatcgcatgctggat
atggggtttgctgaagctatcgatgaggtggttgcatttgcccccgctcagcgccagacg
ctgctgttttctgccacctggcctgtggcaattgcggcaatcagccaacgctaccagcat
gaacctctggcgatagaaatagatacagcagaagcgctcccggcggtacagcagcagttt
tatgaagtaccccgcaatcaaaaaatcgctgtactgcaggctctgttgagccgtgagaaa
ccagcatcctgcgtggtgttttgtaataccaaaaaggactgccaggcagtgtgcgatgcc
ctgaccgcgagtaaccagagtgtgctggcgttgcatggcgatatggagcagcgcgaccgg
gaccagacattggtacgttttgctaatggcagcagccgtgtgctggtggcaaccgatgta
gctgcgcgcgggcttgatataaaagcactggcaatggtggtgaattttgaactggcctgg
gacccggaagtccatgtgcaccgcattgggcgtactgcgcgagccggggaaagtggcctg
gcagtgagcctgtgtgcgccagaagaagccacccgggcaaatgtgctggaagaaatgctt
cacataacgcttaactggtgcccacaacctgccactggcaaggtattgccgcttgaagct
gaaatggcaaccttggcgattgatggtggtaaaaaagcaaaaatgcgccctggtgatatt
ctgggggcattaaccggagatattgggctggacggagccgatattggtaaaatcgccatc
cacccaatgcatgcttatgttgcggtgaaacagtccgttgcgcgtcacgcctggaagcaa
ttgcaacaaggtaaaatcaaagggaaatccgttaaagtacgcttgttgaaataa
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